Gene Nham_1331 details

Gene Information

• Locus tag: Nham_1331
• ID: 4032094
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 1505430
• End bp: 1507277
• Gene Length: 1848 bp
• Protein Length: 615 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637969807
• Product: flagellar basal body FlaE
• Protein accession: YP_576615
• Protein GI: 92116886
• COG category: [N] Cell motility
• COG ID: [COG1749] Flagellar hook protein FlgE; [COG4786] Flagellar basal body rod protein
• TIGRFAM ID: [TIGR03506] fagellar hook-basal body proteins

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTATTT TCGACGCCTT GAATACGTCG GTCGGCGGTT TGCAGGCGCA GTCCTTCGCG 
CTGCAAAACA TCTCCGGCAA CATCGCCAAT GCCCAGACCA CAGGCTACAA GGGCATTACC 
ACCGCCTTCA GCGATCTGAT CCCCGACTCG ACCGCCCCGA ATCGTCAGGT CGCCGGCGGC 
GTGACGGCCT ATGCGACGGC AACTATTTCC AGCCAGGGAA CGGTGTCGGC CTCGACGGTC 
GGCACTTACA TGGCGATCAC CGGCGACGGC TTCTTCAACG TGCAGGCACC GACGGGGAGG 
GTGGACAACC AGCCGCAGTT TTCCGGCGTC ACCTATTACA CGCGGCGCGG CGATTTCCAG 
GTCAACGCCA ACGGCAACCT CGTCAACAGC GCCGGCTACT ACCTGATGGG CGTGCCGGTC 
GATCCCAAGA CCGGCAATCC GCTCGGCAAT GTGCCGCAGG TGCTGCAGTT CCAGAACAAC 
TTCGTTCCCG CGCAGGCCAC CAGCACGCTG CAATACGCCG CCAACCTGCC GGCCGTGCCG 
ACAACGCTGT CGAGCCCGAC CGCGACCGCC GGCACCATCA CCGCGGCCGG CGGGTTGAAT 
CCGTCCGACT TCACCAACAA CTTTAACCCG CTGGTGGTCG GCACGCCTGC GCCGCCCCGT 
ACCGACAATA CCACCTCCGG TTCGCCGGCG ATGAACCAGC AGACGCCGCC GGTCGCGATC 
ACCAGCGCGA CAAAGCTGTC CGGCACCGCG CCGAGCAACT CGTTGCCGAC TGGTTTCGCG 
GCGGGCGATA CTATCACCGT CAACACCCAG ACGATTGAGT TCTACGACTC CGGCGCTGGC 
GGCTCCGCCG GCTCGACGCC CAATACCACC TATCTCGACC TCGCGACTTC AACGGTTGGT 
AACCTCCTGA GTTCGATCGG CACGATCACC GGGCAGGCTC CGACAATCGA TGCGAGCACC 
GGCGCGATCA CGCTGCACAC CGGCACGGCT AATGATCTCA CCATTTCGAG CGCCTCCTCC 
GGCTGGACGT CGATGGGCTT TGGTGCGACC ACCAACATCG CGCGCGGCGG CGGCGGCACG 
CCCGGTGCCG GCGTCGTGAT CGCCAACGAC CAGACCATCT TCCAGCAGGA ATCGATCAGC 
GGCGGCGCGG TTACGGTCTA CGACGCGACC GGCACGGCAG TGAACTTGCA ACTGCGCTGG 
GCCAAGACCG ACAGCGCTTC GCTTGGCGCC GGTCACGCCG ACACCTGGAA CATGTTCTAT 
CAGGCCAATC CGAACGCCAC CGGCACGCAG GCTGCGTGGA TCAACGTCGG CACCAATTTC 
ACCTTCGGCA CCAACGGCCA GCTCTCGAGC CCGGTCGGGT CGTCCATCAC CATTCCCAGC 
GTCAGTGTCG GGACCCAGTC GCTCGGCAAC CTCACGCTGA ATCTCGGCAC CGGCGGCCTG 
ACCCAGTATG CCAGCAGCGG CGGCAACGCC ACCGTCAACG CGATCAACCA GAACGGCTAT 
GCCGCCGGCC AGTTGCAGTC GGTCGCCGTC AACAACGACG GCATCGTGGT CGGCACCTTC 
TCGAACGGGC AGAACCTCTC GCTCGCGAAG GTGTCGCTGT CGCACTTCAA CGGCACCAAC 
TACCTCAAGG CGCTCGACGG CGGGGCCTAT GCGGTGACCG ATGAGTCGGG ACCTGCGATC 
GCCGGCGCAG CAGGACACAT CAACGGCTCG TCGCTCGAAG GCTCCAACAC CGATATCGCC 
GACGAGTTCA CCAAGCTGAT CGTGACGCAG CAGGCTTATT CGGCGAACAC CAAGGTCATC 
ACCACCGCGA ACAGCATGGT TCAGGATCTC TTGAACGTGC TGCGCTAG 

 

Protein sequence

MGIFDALNTS VGGLQAQSFA LQNISGNIAN AQTTGYKGIT TAFSDLIPDS TAPNRQVAGG 
VTAYATATIS SQGTVSASTV GTYMAITGDG FFNVQAPTGR VDNQPQFSGV TYYTRRGDFQ 
VNANGNLVNS AGYYLMGVPV DPKTGNPLGN VPQVLQFQNN FVPAQATSTL QYAANLPAVP 
TTLSSPTATA GTITAAGGLN PSDFTNNFNP LVVGTPAPPR TDNTTSGSPA MNQQTPPVAI 
TSATKLSGTA PSNSLPTGFA AGDTITVNTQ TIEFYDSGAG GSAGSTPNTT YLDLATSTVG 
NLLSSIGTIT GQAPTIDAST GAITLHTGTA NDLTISSASS GWTSMGFGAT TNIARGGGGT 
PGAGVVIAND QTIFQQESIS GGAVTVYDAT GTAVNLQLRW AKTDSASLGA GHADTWNMFY 
QANPNATGTQ AAWINVGTNF TFGTNGQLSS PVGSSITIPS VSVGTQSLGN LTLNLGTGGL 
TQYASSGGNA TVNAINQNGY AAGQLQSVAV NNDGIVVGTF SNGQNLSLAK VSLSHFNGTN 
YLKALDGGAY AVTDESGPAI AGAAGHINGS SLEGSNTDIA DEFTKLIVTQ QAYSANTKVI 
TTANSMVQDL LNVLR