| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1289 |
|---|
| Symbol | |
|---|
| ID | 4032130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 1451653 |
|---|
| End bp | 1453338 |
|---|
| Gene Length | 1686 bp |
|---|
| Protein Length | 561 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637969766 |
|---|
| Product | DNA repair protein RecN |
|---|
| Protein accession | YP_576574 |
|---|
| Protein GI | 92116845 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0497] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGCGC GCCTTTCGAT CCGCGACATC GTCCTGATCG AGCGGCTCGA TATCGAGTTC
GCCGCCGGCC TTGCGGTGCT GACCGGCGAA ACCGGTGCGG GAAAATCCAT CCTGCTCGAT
GCCTTCGCGC TGGCGCTCGG CGGTCGCGGC GACGCCGGGC TGGTCCGCCA CGGCGCGGAT
CAGGGGCAAG TCACCGCCAC CTTCGATATT CCAAAAAACC ATCCGGCCAG CGCGATCCTC
GCCGCCAACG ACATCGAGGG CTCTATTTCT GAAGATTCGG GTGAGATGAT TCTGCGCCGG
GTGCAGCTCG CCGACGGCCG CACCCGTGCC TTCATCAACG ATCAGGCGAT CAGCGTGCAG
ACCTTGAAGG CGGTGGGCGC GGCGCTGGTG GAAATTCACG GTCAGCACGA CGAGCGGGCG
CTGGTCGATG CCTCGACCCA CCGGCGGCTG CTCGATGCCT TTGCCGGCCT GGAGACCGAT
GTCGCTGCGC TGGAAACGTT GTGGGAGGGC CGCCGCACCA CCCGCGCGGC GCTCGACGAT
CACCGCGCCG GTATGGAGCG CGCCGCGCGC GAGGCCGACT ATCTGCGTCA TGCGTCCGAC
GAGTTAAGAC AACTCGCGCC GCAGGACGGC GAGGAAACGG CTTTGGCCGA ACGCCGCACC
ACGATGATGG CCGGCGAAAA GATCGCGGCC GACCTGCGCG AGGCGCAAGA TGCCGTCAGC
GGCAACCGCT CGCCGGTGAG CGTGTTGGCG GCGGCGGTGC GGCGGCTGGA ACGGCGGGCC
GCGAGTTCGC CGCAACTGGT CGAGCCGGCG GTGAGAGCCA TCGATGCCGC CATCAACGCG
CTGGAGGAAG CGGACCAGCA TCTCGCGGCG GCGCTCACTG CTGCCGATTT CGACCCGGCC
GAGCTGGAGC GCATCGAGGA ACGGCTGTTC GCGCTGCGCG CGGCGTCACG CAAATATACG
ACGCCGGTGG ACGGGCTCGC TGCGCTCGCC GCCAAGTTCG CGAACGACGT CGCGCTGATC
GACGCCGGCG CGGATCGACT GACCGTGCTG GAAAAGGAAG CGGCTGAAGC CGACAGGCGC
TTTGCGGCGG CGGCCGCGAA ACTCTCCGTA GCGCGCACCA GAGCCGCGGA AAAACTCGAC
AAGGCGGTCA ATGCGGAACT GGCACCGCTG AAACTCGATC GCGCGACATT TTCCACGCAG
ATCGAATCCG ACTCCGCGAC GCCGGGGCCG CAAGGCTTCG ATCGCGTCGA GTTCTGGGTG
CAGACCAATC CGGGCACCCG GCCGGGGCCG CTGATGAAGG TCGCCTCCGG CGGTGAGCTG
TCGCGCTTTC TGCTGGCGCT GAAGGTGGTG CTTTCTGATA AGGGCTCAGC GCCGACGCTG
GTGTTCGACG AGATCGACAC CGGAGTCGGA GGTGCGGTGG CGGACGCCAT CGGTGCGCGG
CTGGCGCGGT TGGCCTGCAA GGTGCAGGTG ATGGCGGTGA CCCATGCGCC GCAGGTCGCG
GTGCGCGCCG ACCAGCATCT GCTGATTTCG AAGGACGCAC TCGATCGCGG CAAGCGCGTC
GCCACCCGCG TCGCGACGCT GGCGCAGGAT CACCGCCGCG AGGAAATCGC GCGGATGCTG
GCGGGGGCCG AGATCACGGC GGAGGCCCGC GCCGCTGCCG ACCGGCTGTT GAAGGCGGCG
GGGTAA
|
|---|
| Protein sequence | MLARLSIRDI VLIERLDIEF AAGLAVLTGE TGAGKSILLD AFALALGGRG DAGLVRHGAD
QGQVTATFDI PKNHPASAIL AANDIEGSIS EDSGEMILRR VQLADGRTRA FINDQAISVQ
TLKAVGAALV EIHGQHDERA LVDASTHRRL LDAFAGLETD VAALETLWEG RRTTRAALDD
HRAGMERAAR EADYLRHASD ELRQLAPQDG EETALAERRT TMMAGEKIAA DLREAQDAVS
GNRSPVSVLA AAVRRLERRA ASSPQLVEPA VRAIDAAINA LEEADQHLAA ALTAADFDPA
ELERIEERLF ALRAASRKYT TPVDGLAALA AKFANDVALI DAGADRLTVL EKEAAEADRR
FAAAAAKLSV ARTRAAEKLD KAVNAELAPL KLDRATFSTQ IESDSATPGP QGFDRVEFWV
QTNPGTRPGP LMKVASGGEL SRFLLALKVV LSDKGSAPTL VFDEIDTGVG GAVADAIGAR
LARLACKVQV MAVTHAPQVA VRADQHLLIS KDALDRGKRV ATRVATLAQD HRREEIARML
AGAEITAEAR AAADRLLKAA G
|
|---|
| |