| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1206 |
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| Symbol | |
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| ID | 4032297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1361321 |
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| End bp | 1362661 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637969686 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_576495 |
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| Protein GI | 92116766 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCCC ATGCATCTCG TCGCTATGGC CTATCGCGCC GCGACGTCAT CAAGACCGCT
GTGGGTGCGG CCGCCACCGT CGGCCCATTC TTCCATGTTG CGCCGGCTCG TGCGGCCAAG
ACGCTGAAGA TCCTGCAGTG GAGCCACTTC GTCCCCGGCT ACGACAAGTG GTTCAACAAC
ACCTACATCA AGGAATGGGG CGCCCAGCAT GGCACCGAAG TGGTCGTCGA CAACATCAAC
CTCGGCCTGA TCCCTTCGCG TGCGGCAGCG GAAGTATCGG CGCAGAAGGG GCATGACCTC
GTGATGTTCC TCGCCCCGCC TTCGGTTTAC GAAGAGCAGG TCGTCGACAT GAAGGATGTC
TACGACGCGT GCGAGAAAAA GTACGGCAAG CCGATCGATC TCGCCGTAAA GAGTACCTAC
AACCCCAAGA CCCGGAAGTA CTTCGCGTTC TCCGACAGCT TCGTCCCCGA TCCTGTCAAC
TACCGCTCGG ATCTTTGGGG CGACGTCGGC ATGAAGCCCG ATAGCTGGGA CAATGTCCGC
ATCGGCGGCA AGAAGATCAA GGACAAGACC GGAATCCCGG TCGGCATCGG CCTCTCCGCC
GAGCTCGACA CCGCGATGGC AATGCGCGCG ATCATGTATT CATTCGGCGC GCACGAGCAG
GACGTCGATG GCAATCTCGC GATCAATTCC AAGGAAACCC TCGAAGCCCT CAAATTCGTC
AAAGCGCTGT TCGAGGAAAC GGAAACGCCC GAAGTTTTCG CGTGGGATCC GTCGTCGAAC
AATCGGCAGA TGCTCGCCGG CAGGTCATCT CTGGTGCTGA ACGCGATTTC GGTCACGCGC
ACGGGCGAAA ACGACAAGAT GCCGATCCAC GAGAAGATTG CGCTCGCCAA GCCGCCGAAA
GGCTCGGTTC GGCAGATCGG CCTTGAGCAC GTGATGGATT GCTACGTGAT CTGGAAATTC
TCCGAAAACA TTGACGGCGC AAAAATGTTC CTGGTCGACT ACATCGACAA CTTCAAGCAG
GGCTTCATGG CCAGCGAGTA TTACAACTTC CCCTGCTTCT CGAAGACCGT TCCCGACCTG
GCACAGATCA TCTCCAGGGA TTCCAAGGCC GTGCCGCCGG ACAAGTACGC GGTGCTTTCG
GACGTGCTCG ATTGGGCAAC TAACGTCGGC TATCCCGGCT ACTCCAACGC CGCGATCGAC
GAAACTTTCA ACACCTGGGC GATCAATACC ATGTTCGCAG AAGCTGCCGC GGGCGCCGAA
ACTCCGGAGA ACGCTCTCAA GCGGGCGGAA GCCAAGATGA AGGCGATCTG GGCCAAATGG
AAAGATCGAA AGATGATTTG A
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| Protein sequence | MASHASRRYG LSRRDVIKTA VGAAATVGPF FHVAPARAAK TLKILQWSHF VPGYDKWFNN
TYIKEWGAQH GTEVVVDNIN LGLIPSRAAA EVSAQKGHDL VMFLAPPSVY EEQVVDMKDV
YDACEKKYGK PIDLAVKSTY NPKTRKYFAF SDSFVPDPVN YRSDLWGDVG MKPDSWDNVR
IGGKKIKDKT GIPVGIGLSA ELDTAMAMRA IMYSFGAHEQ DVDGNLAINS KETLEALKFV
KALFEETETP EVFAWDPSSN NRQMLAGRSS LVLNAISVTR TGENDKMPIH EKIALAKPPK
GSVRQIGLEH VMDCYVIWKF SENIDGAKMF LVDYIDNFKQ GFMASEYYNF PCFSKTVPDL
AQIISRDSKA VPPDKYAVLS DVLDWATNVG YPGYSNAAID ETFNTWAINT MFAEAAAGAE
TPENALKRAE AKMKAIWAKW KDRKMI
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