Gene Nham_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1188 
Symbol 
ID4032646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp1345823 
End bp1346353 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content59% 
IMG OID637969674 
ProductISSpo6, transposase OrfB 
Protein accessionYP_576483 
Protein GI92116754 
COG category[L] Replication, recombination and repair 
COG ID[COG3335] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAAGC AGCGCGAGCG GCTGATCTTC ATTGACGAAA CCGGCACCAC CACCAAGATG 
GTTCGCCAGC GTGGACGATC GCTGAAAGGA ACGCGGCTGA ACAGCAAGGC TCCATTCGGT 
CACTGGGAAA CGCAGACCTT CGTAGCAGGC CTCAAGTGCG ATGGCCTCGT CGCCCCCTGG 
GTTATCGATG CCCCAATGAA CCGGATCATC TTCGAGACCT ATGTCGACAC CCAACTCGCG 
CCCGCCCTCA GGCCCGGTGA TGTCGTCATC CTGGATAATC TCTCCAGCCA CAAGAGCGAG 
AAGGCCGAAA AAGCCATCCG CGCACGGGGC GCGTGGCTCC TGTTCCTGCC GCCCTACAGC 
CCGGATCTCA ATCCCATCGA AATGGCCTTC GCAAAACTGA AAGCTCATCT GCGAGCCGCC 
GCAGCCAGAA CCATCGACGC TCTCTGGAAA GCCATCGGCA ACATCTGCGC GCTCTTCTCT 
CCGCAAGAGT GCTCAAACTA CTTCAAAGCC GTAGGATACG GATTCAATTG A
 
Protein sequence
MRKQRERLIF IDETGTTTKM VRQRGRSLKG TRLNSKAPFG HWETQTFVAG LKCDGLVAPW 
VIDAPMNRII FETYVDTQLA PALRPGDVVI LDNLSSHKSE KAEKAIRARG AWLLFLPPYS 
PDLNPIEMAF AKLKAHLRAA AARTIDALWK AIGNICALFS PQECSNYFKA VGYGFN