Gene Nham_1129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1129 
Symbol 
ID4031579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1275316 
End bp1276038 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content61% 
IMG OID637969626 
Productmethionine sulfoxide reductase A 
Protein accessionYP_576436 
Protein GI92116707 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGTA ACCCGTTCGG TCGTAATGCC CTCGTCGCCG CTGCTGTCGC CGGCACAGTT 
GCACTGTCGT GGCTTCTCAC CGGAGCTTCG CGCGCCGCGG GAGACGCCGT GATCATTCCG
CCGCCGGCCC TGGATGCGAA GGCTGCCGAC GGCATCCAGA CCGCGGTCGT CGCCGGCGGC
TGCTTCTGGG GCGTGCAGGG CGTGTTCCAG CATACCGCCG GCGTGGCCAA CGCAGTCTCG
GGTTATGCGG GCGGCGCGAA GGAGACCGCG AAATACGAGA CGGTGAGCAC CGGCACCACG
GGACACGCGG AGTCGGTCGA GATCAAGTTC GACCCGAAGC AGATCAGCTA TGGAAAAATC
CTGCAGATAT TCTTCTCGGT GGTGCACGAT CCGACCCAGC TCAATCGCCA GGGACCGGAC
ACCGGGACCC AGTATCGCTC GGAGGTTTTT ACGCTCAACG GCGAGCAGAA AAAGGTCGCC
GATACCTATA TCGCCCAGCT CGATGCCGCC AGGGTCTATA ACAAGCCGAT CGTGACCAAG
GTTGGAACGC TGCAGGGATT TTTCCCGGCC GAAGCCTATC ATCAGGACTA TCTGACGCGG
CACCCCAACC AGCCCTATAT TGCGTATTAT GACCTTCCGA AGATCCGGAA CTTGAAGACA
ATTTTTGCGG ACAACTATAT CGAGAAGCCG ACGCTGGTCA GCAGCGTCAA GACGACCGAC
TGA
 
Protein sequence
MTRNPFGRNA LVAAAVAGTV ALSWLLTGAS RAAGDAVIIP PPALDAKAAD GIQTAVVAGG 
CFWGVQGVFQ HTAGVANAVS GYAGGAKETA KYETVSTGTT GHAESVEIKF DPKQISYGKI
LQIFFSVVHD PTQLNRQGPD TGTQYRSEVF TLNGEQKKVA DTYIAQLDAA RVYNKPIVTK
VGTLQGFFPA EAYHQDYLTR HPNQPYIAYY DLPKIRNLKT IFADNYIEKP TLVSSVKTTD