| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1072 |
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| Symbol | |
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| ID | 4031639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1204455 |
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| End bp | 1207718 |
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| Gene Length | 3264 bp |
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| Protein Length | 1087 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637969570 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_576380 |
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| Protein GI | 92116651 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCAAT CGCGTCCGGT ATCCGTTAGT AGCACGATCG AGGACATGCA GGCGGAGCGC
AACGCGCTCG AAGCCTTTGC CAATGATCGC GCCCGCGACT TCGTTGGCAG GCAGTCGATC
ATTGCGCGCG TCACCGACCT CTGTCTCTCC CCCGCGAAAG AAAATCTCTC GCCCACGAAA
GAGGCCACGT CGTGGGGCAT CTGCATTACC GGCGATCCGG GTTCGGGCAA GAGCGCGCTG
TTCGGCGAAC TTCTCCACCG CATGAAGGGG ACCGACGCTT TCGTTCTCGC TCACGCCGCC
GGCGCGAATC CGCGCGCCTC ATCGGTCGAT GCCATGCTGC GTCGCTGGAT CGTCGAACTC
GGCAGCGCGC TCGGCGTCGG CAACGTTGAC CTCGCCGCGA ATATCGACCC GGAGATTGTC
GAGAGGGCTT TCGTCTCGCT GCTCACGCGG ATGGCGCCGC AGCGGCGCGT GGTTATGGTG
ATCGATGCGA TCGACCAGTT CAAGAAGACC CCGCGCGGAA AGTTTACGAC CTGGCTGCCG
CGGATGTGGC CGACCAATAC GCGGCTCGTC GCAACCGCCA TTGACGGCGG CGCCTCCAAG
GCGCTGGCCG AGCGTTCGGG CGTGGAAGCG TTGTCTCTGC CGCCGCTGGA CGCGACCGAG
GCACGTGGCA TCATCGATGC CGTATGCAAA CGCAATAACC GCCAGTTGGA GCCTTCGGTG
ATCGATGCGC TGCTGGCGAA GAAGCATGCG GGCGCGCCGG CGTCGGGCAA TCCGTTGTGG
CTGGTGCTCG CCCTCGAGGA ACTGGAGCTG CTCGACAGCG ATGATTTTGC CGACATGCAG
CGCGAATATG TCGGCCCTCC GGAGGAACGC GTCGCGAGTT TGATGCTCGA CACTGTCGGC
GCCATGTCGA CGGACATTTT ACGCCTCTAT CACGCAACGT TCGACAGCGC GGCCGAACTG
TTGGGCCCCG CCGTTACGTC GGCCTTTATC GGTCTCATTT CCGCGAGCCG GACGGGATGG
CGAGAGAGCG ATTTTCGTCA GTTGCTGCCG CAGGTCAGCG GCGAACCCTG GGACGAACAG
CGTTTCGCCG CGCTGCGCCG CCTGTTCCGC GGTCAGATTC ACCAGCATGG CGATCTTGCG
CAGTGGAATT TCAATCACGC CCAGGCGCAG GCCGCCGCCC GCTCACGCCT CGCGGCGCTG
CGCATCTCGA ATCCCCAACT GCACCTGTTG ATCGCCGATC ATCTTTTGAC CCTGGCGCCG
GACGACCTGC TGCGCGCGAC TGAAACCATG GTCCACCTTC TGGCGAGCAA GGACGACACC
CGTGCAGGGC AGTACTATGG CGATTCATCG TTGAGCGAGG CGGGGCTGCA AGGCGCCACG
CGTGCGCTCG CCGACGCCAT GATTTCGCCG GCGACAGGCA CTCCGGCGAG CGCGGCGCAA
GAGATTTGCC GTTTGCTTGA CAACCCCGAC AACGCTGTCC GCGCACTCGC GGCCGAGCGT
TTCCTCTTCA ATCTCGACGA CGCGGCCGAA CGGCACGTGT CGCCCGATGC CCGCATGACC
GTCTTGAATG CGATCGAAAG CGCGTTCGAG CAGCTGCTTC GCACCGATCC CGACAACGCC
GGCTGGCAGC GCAATCTATC GGTCGCACGC GATCGTGTCG GCGACGTGCT GGTGGCGCAG
GGCAAGCTGC CCGACGCGCT GAAATCCTTC CGCGACGGGC TCGCGATCAG GGAGCGGCTG
GCGAGCGCCG ATCCCGGAAA CGCCGGGCGG CAGCGCGATC TGTCGCTGTC GCACGAGAAG
ATCGGAGACG TGCTGGCGGT GCAGGGCAAG CTGCCCGAGG CGCTGGAAGC CTTCCGCAGC
CAGCTCGCGG CCGCCGAGCG GCTGGCGAAC GCCGACCCTG ACAATACAGA GCTGCGGGTC
GGTCTGTCGC TGTCGCACGA GAAGATCGGC GAAGCGCTGA TGGCGCAGGA CAAGCTGCCC
GAGGCGCTGG AAGCCTTCCG CAACCAGCTC GATATCATCG AGCAGCTGGC GCGCGCCGCC
GACACCGATG ACAACGAGTG GCAGCGCGAC CGGACGCTGT CCTACGATCG CATCGGCGAC
GTGCTGATGG CGCAGGGCAA GCTGCCCGAG GCGCTGGAGG CCTTGCGCGA CGGGCTCAAG
ATCAAGGAGC GGCTGGCGAA GGCTCATCCC GACAACACCG GCTGGCAGCG CAGTCTGTCG
CTCTCATATG ATCGTATCGG CGACGTGTTG GTGACGCAGG GCAAGCTGCC CGACGCGTTG
ACAGCCTTCC GTACAGGACT CGCGATCGCC GAGCAGTTGG CGCGCGCCGA GCCCGACCAC
GTCGGTTGGC AGCGCGATCT GTCGGTGTCC CACTCCAAGG TCGGCGACGT GCATGTGGCG
CAGAGCAGTC TGCCCGAAGC GTTGAAATCC TTCCATGAAG CGCTGACGCT CAGACAGCGG
CTGGCACACG CCGACCCCGA TAATGTTGAC TGGCAACGCG GCCTGGCGGT GTCCAACGAT
CGTATCGGCG ACGTGCTGAT GGCTCAGGAG AATCTGGGCG AGGCGCTGAA GGCCTTCCAG
GACCAGCTCG CAATTGCCGA GCGACTGGCG CAGGCCAACC CGGGCAACGC CGGCTGGCAG
CGCGATCTGT CGGTGTCTCA CGAGAAGGTC GGCGACGTGC TGGTGGCACA AGGCAATCAG
GCCGAGGCGC TGAAAGCCTT CCGCAACGCC CTTGCGATCA GAGAGCGGCT GGCGCGCAAC
GACCCCGGCA ACTCCGGCTG GCAGCGCAGT CTGTCGGTGT CACACGATTG TATCGGCGAC
GTGCTGGAAT CGCAGGGCAA TCAGGCCGAA GCGCTGAAAG CCTTCCGCAA CGCCCTTGCG
ATCAGGGAGC GACTGGCGCA AAGCGACCCC GCCAACGTCG CCTGGCAGCG CGATCTTACG
GTATCCTACG ATCGTATCGG CGAAGTGCTG GAAGGGCTGG GCGATCAGGC CGAGGCGGTG
AAAGCCTTTA ACGAGGGGAT CGCGATCAGC GAGCGGCTGT CGCTCGCCGA CCCCGGCAAC
GTCGACTTGC AGCGCAGCGT TGCCGTGAGC CAGGGGCATC TGGCCGAGAT GTATCGTCGA
TCCAATGACC ACAACAATGC GCTGGCTGCG CTGCGGCAGG GACAAGCCGC CATGGAGCGC
GTCGTCAGGC GCGCGCCAGA CAATGCCGGC TGGAAGAAAG ATCTGGACTG GTTCAACGAG
CAGATTGAGA CCTTGGCGGA TTAA
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| Protein sequence | MSQSRPVSVS STIEDMQAER NALEAFANDR ARDFVGRQSI IARVTDLCLS PAKENLSPTK
EATSWGICIT GDPGSGKSAL FGELLHRMKG TDAFVLAHAA GANPRASSVD AMLRRWIVEL
GSALGVGNVD LAANIDPEIV ERAFVSLLTR MAPQRRVVMV IDAIDQFKKT PRGKFTTWLP
RMWPTNTRLV ATAIDGGASK ALAERSGVEA LSLPPLDATE ARGIIDAVCK RNNRQLEPSV
IDALLAKKHA GAPASGNPLW LVLALEELEL LDSDDFADMQ REYVGPPEER VASLMLDTVG
AMSTDILRLY HATFDSAAEL LGPAVTSAFI GLISASRTGW RESDFRQLLP QVSGEPWDEQ
RFAALRRLFR GQIHQHGDLA QWNFNHAQAQ AAARSRLAAL RISNPQLHLL IADHLLTLAP
DDLLRATETM VHLLASKDDT RAGQYYGDSS LSEAGLQGAT RALADAMISP ATGTPASAAQ
EICRLLDNPD NAVRALAAER FLFNLDDAAE RHVSPDARMT VLNAIESAFE QLLRTDPDNA
GWQRNLSVAR DRVGDVLVAQ GKLPDALKSF RDGLAIRERL ASADPGNAGR QRDLSLSHEK
IGDVLAVQGK LPEALEAFRS QLAAAERLAN ADPDNTELRV GLSLSHEKIG EALMAQDKLP
EALEAFRNQL DIIEQLARAA DTDDNEWQRD RTLSYDRIGD VLMAQGKLPE ALEALRDGLK
IKERLAKAHP DNTGWQRSLS LSYDRIGDVL VTQGKLPDAL TAFRTGLAIA EQLARAEPDH
VGWQRDLSVS HSKVGDVHVA QSSLPEALKS FHEALTLRQR LAHADPDNVD WQRGLAVSND
RIGDVLMAQE NLGEALKAFQ DQLAIAERLA QANPGNAGWQ RDLSVSHEKV GDVLVAQGNQ
AEALKAFRNA LAIRERLARN DPGNSGWQRS LSVSHDCIGD VLESQGNQAE ALKAFRNALA
IRERLAQSDP ANVAWQRDLT VSYDRIGEVL EGLGDQAEAV KAFNEGIAIS ERLSLADPGN
VDLQRSVAVS QGHLAEMYRR SNDHNNALAA LRQGQAAMER VVRRAPDNAG WKKDLDWFNE
QIETLAD
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