| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0992 |
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| Symbol | |
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| ID | 4031752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1097669 |
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| End bp | 1098817 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637969492 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_576302 |
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| Protein GI | 92116573 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGCCC TCCCGTCGGT CAAAATCATC GTTGCTGGAA CATTTCTGTT GACGACATCT
GCGGTTGCGC AAGTGAGCTC TGGTGCACCC CCGGCGGTAG GAGTTGTTAC GGCTGAATTC
AAACCGATGG CGGAGAGCAC GGAAATCAAC GGTCGCATTC AGGCCAGGGA TCGCGTTGAT
CTGGTTGCGC GTGTAACAGC GTTTTTGAAC GAACGTCTCT TTACGGAAGG CGCGGACGTC
AAGAAGGGCC AGCTTCTGTA TCGGCTTGAG CGGGCGCCGT TCGAAGCCGA CGTCGAGGCT
AAAGAAGCGG CTGTTGCTCA GGCTCAGGCT CAACTTGAGA ACGCCGATCT AGCGCTTTCC
CGTGCGCAGG AACTGTTGCG GAAAAATTCC GGTACCCAGG TCACGGCCGA CAGCGCGCTG
GCGGCGCAGC GCACGGCGGC AGCGCAGGTG AAGGCCGCGC AGGCGCAGCT CCATCAATCG
CAGATTAATC TCGATTACAC CGAAATAAAA GCGCCGATCG ACGGCCGCAT TGGCCGAACC
TCGATCACGG TCGGTAACGT CGTCAGCCCC ACCAGCGGTA CCTTGGCGAC GATTGTCAGC
CCGGATCCCA TGTACGTGAC CTTTCCCGTC TCGGTGCGCC GCGTCCTTGA ACTAAGGGAT
CGATATGCCG GCAAGGGTGG CTTTGACGCC GTCAAAATTC GCGTGCGCTT GCCCAATGGG
GAAATGTACG GTCAGACCGG CAAGCTCGGT TTCGTCGATA TCGGCGTCGC CAGGGACACA
GACACCATCA CCTTGCGCGG TACAATCGCC AATCCGGTGA TTCAGACGGT CGGAGAGAGC
AAGCTTCACG AATTGACGGA CGATGAGTTT GTTACCGTAT CGCTTGAGGC TGTCGAGCCG
CTCAAGGTGC TGGCTATCCC GCGCGCCGCG ATTCTGTCCG ACCAGCAGGG TGACTATGTC
TTCGTGGTCA ATGACAAGAA TGTGGCCGAG CAACGCCGCG TGAAGCTGGG GCAATCAACC
CCTGACGTCG CCGCGGTGGT CGATGGTTTG AAGCCGGGCG AACGGGTCAT CGTGGAGGGA
ATCCAGCGGG TGCGGCCAAA TCTTGTGGTA GCGCCGGCGC CGGCTTCATC AACGCCTGCG
GGGAGATAA
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| Protein sequence | MHALPSVKII VAGTFLLTTS AVAQVSSGAP PAVGVVTAEF KPMAESTEIN GRIQARDRVD
LVARVTAFLN ERLFTEGADV KKGQLLYRLE RAPFEADVEA KEAAVAQAQA QLENADLALS
RAQELLRKNS GTQVTADSAL AAQRTAAAQV KAAQAQLHQS QINLDYTEIK APIDGRIGRT
SITVGNVVSP TSGTLATIVS PDPMYVTFPV SVRRVLELRD RYAGKGGFDA VKIRVRLPNG
EMYGQTGKLG FVDIGVARDT DTITLRGTIA NPVIQTVGES KLHELTDDEF VTVSLEAVEP
LKVLAIPRAA ILSDQQGDYV FVVNDKNVAE QRRVKLGQST PDVAAVVDGL KPGERVIVEG
IQRVRPNLVV APAPASSTPA GR
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