Gene Nham_0989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0989 
Symbol 
ID4031749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1093618 
End bp1095045 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content59% 
IMG OID637969489 
Producthypothetical protein 
Protein accessionYP_576299 
Protein GI92116570 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGCGA TGGCGCTCGC TGCCGTTTTG GCGGCGACAA CAATGGTGAT ACCTGCTGCT 
GCCTATGCAC AGCAGGTGCC GGCAGGTCCG GCAGATGTTG CAAAACCAGG TGGAAAAATT
CCAGGCGCCC AGAAATTGGC GCTCGTTAAG GTAGCTGACG GATTTCATGA TCCGGTCGGC
GTGACCGCAG CCAATGACGG CTCCGGGCGT ATCTTCGTGG TCGAACGCGC CGGCCGCGTC
AGGATCGTCG GCAAGGACGG CAAGGTGCTG CCTGAGCCGT TCATCGATCT CACCAATTTC
AATCCGCTTG GTTCGGACGT GCAGACCGGG TTTGTCGAGC AGGGACTGTG GTCGATCGCA
TTTCATCCCA AGTTCAAGGA CAACGGTTAC GTCTTTGTCC ACTACGCGTC GCTGCCGTTC
AACGGCGCTT CCATCATCGC GCGGATCACC GTCGATCCCA AGAGCCCGAA CCATGTCACA
TCGGAACAGC TCACCAAGAG CATCAAGGTT CTGATGAACA TCCCGCAGCC CTACTACAAT
CACTACGGCG GCATGATCGC GTTCGGCCCC GACGGCAAAT TGTACATCGG CAAGGGTGAC
GCCGGCTGGG AAGGCGATCC GCTCAATGCC GGGCAGAACA TCAATGTGCT CTGGGGCAAG
CTGCTGCGTA TCGACGTCGA TACGCCGGAT GATGTGGCTT ACGCCATTCC AAAGGACAAT
CCGTTCGCCA AGGCGGACAA GGCTCAACTG ATGTCGCTGT TTGGCATCAA CGAGCAGGGT
TTTGCGCAAA ACAAAATCGG TTCGCGTCCG GAGATCTGGG CTTACGGCCT GCGCAATCCC
TACATGTTCC ACTTCGACCA GAAGTCGGGT GACCTGTTCA TCGCCGATGT CGGACAGAAC
CACTGGGAGG AGATCGACTA CCAGCCGGCG GCGTCGAAGG GTGGAGAAAA CTACGGCTGG
AAGTTCAACC AGGGCTCATA TTGCCACCCG GCGCTGTCGG AAGATCAGAA GTGCCCGATC
GTCGGCGTGT TGCCGGCGGC GGAATACCCC CACGACCAGC CGTTCGAGAC CGGCCCCAAG
GCCAAAGAGG GTACCGGATG TTCGGCCCAG GGACTTGGCG TCGCCAATTA CGGCGGCATG
AACAAGACCT ATCTGGTCGG AGACTGGTGT TCCGGCCGTC TGTTCGGCGT GGCCTGGGAT
AGCAGCGCCA ACAAGTGGCA GATGCAGGAG TTCATGCAGA CCCAGTTGCA GTTTACTGCC
GGCAATGTCG ATGCCGACGG CTTCGTGCTC GCAACCAACT GCTACTGCTT CTACACCGAC
GACAAGGGGC CGAATGCCAA TCCGGTGGGC GCGCTCTGGC GCATCATACC TGCCGACAAG
GTTACGCCCG ACATGGAGGT CGCGAAGACA AAAAGTAACC AAAAGTAA
 
Protein sequence
MRAMALAAVL AATTMVIPAA AYAQQVPAGP ADVAKPGGKI PGAQKLALVK VADGFHDPVG 
VTAANDGSGR IFVVERAGRV RIVGKDGKVL PEPFIDLTNF NPLGSDVQTG FVEQGLWSIA
FHPKFKDNGY VFVHYASLPF NGASIIARIT VDPKSPNHVT SEQLTKSIKV LMNIPQPYYN
HYGGMIAFGP DGKLYIGKGD AGWEGDPLNA GQNINVLWGK LLRIDVDTPD DVAYAIPKDN
PFAKADKAQL MSLFGINEQG FAQNKIGSRP EIWAYGLRNP YMFHFDQKSG DLFIADVGQN
HWEEIDYQPA ASKGGENYGW KFNQGSYCHP ALSEDQKCPI VGVLPAAEYP HDQPFETGPK
AKEGTGCSAQ GLGVANYGGM NKTYLVGDWC SGRLFGVAWD SSANKWQMQE FMQTQLQFTA
GNVDADGFVL ATNCYCFYTD DKGPNANPVG ALWRIIPADK VTPDMEVAKT KSNQK