| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0958 |
|---|
| Symbol | |
|---|
| ID | 4031796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 1060692 |
|---|
| End bp | 1061777 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637969461 |
|---|
| Product | luciferase-like |
|---|
| Protein accession | YP_576271 |
|---|
| Protein GI | 92116542 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATA GCATATACGC GTCAACCGTG AGTTCGGAAA TCGGACGTCC AGTGCCCGAC
GCGGGCAAGG CAGCAGGGCC CTTCCAGCTC GGCTTGTCCG GCTGCGCAGG CGGCCTTGAA
TCGATTTCGA CCTCCCAGAT TCTTGATCTG GCCGAGAAAG TCGAGACTTT GGGCTTCGCC
GGGATCTGGC TCAACGAAGA GCACTTCCAG GGCAGCATCG TGGAGGTCGA GGGTCGGCGA
TGTCACTCCC CGCTCGTCCT GGCGTCCGCG ATCCTGGCGC GTACCAAGCG GCTGCGCGTC
GGCTTTTCCG TGCTGTTGGC GGCACTGCAC AATCCGGTCC GTCTTGCCGA AGAAATCGCG
ACGCTCGATG TGCTCTCGGA CGGCCGCGTG GACCTCGGCA TTTCCCGCGG CAACAATCCC
CGCTATCTCA ATGCCTACGG CGTCAAACCG GAAGGCACCG CCGACCATTT CAGGGATATG
CTGACATTCC TGCCCCGCGC CTGGGCGGTC GGCACGCTGC CATTCGGCGA AGCCAGTCAC
TCGATCGAGC CGAAGCCGAT CCAGACGCCG CACCCACCCA TTTATGTCGG CACCAACACC
AACGAGACCG CCGCGTGGGC GACGCAAAAC GGCCACAGGA TCATCTGTCA TGGCATCATC
AGCATGCCGA ACCAGCGCCG GCTGATGCGC GCTTATGTCG ATGCCGGCGG CGATCCCGCG
GAAGTGCCGT TCGGGCGCTT TGTCTATGTC AGCGAGACCG ATGCTTCTGC GCGCAAGGAG
TTATGGCCGA CCATCGAGAA GTTGACCACA CGGCTGAAGG GCTTCGGCTT GTTCAAGCGC
GAAGGGATAA TCGACGAGGC GCGCCTCCAA CCGGAGAACT TCTACAGCGA CATGGTGATC
GCCGGCTCAC CGGAGACCTG CGCCGAGAAG TTCATGGCCC TTCACGACGA ACTCGGCGTG
ACCTACCTCA ACGCGCTCTC CGCCTTCTTC GGCTTCCTGC CGCTTCCACT GCTCGAACGT
TCACTCGACC TGATGGGAAG CGTGTTGCGG CCGAGACTCG AAAAGGCGCT GGCGACCGCC
GCCTGA
|
|---|
| Protein sequence | MTDSIYASTV SSEIGRPVPD AGKAAGPFQL GLSGCAGGLE SISTSQILDL AEKVETLGFA
GIWLNEEHFQ GSIVEVEGRR CHSPLVLASA ILARTKRLRV GFSVLLAALH NPVRLAEEIA
TLDVLSDGRV DLGISRGNNP RYLNAYGVKP EGTADHFRDM LTFLPRAWAV GTLPFGEASH
SIEPKPIQTP HPPIYVGTNT NETAAWATQN GHRIICHGII SMPNQRRLMR AYVDAGGDPA
EVPFGRFVYV SETDASARKE LWPTIEKLTT RLKGFGLFKR EGIIDEARLQ PENFYSDMVI
AGSPETCAEK FMALHDELGV TYLNALSAFF GFLPLPLLER SLDLMGSVLR PRLEKALATA
A
|
|---|
| |