| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0957 |
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| Symbol | |
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| ID | 4031776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1058259 |
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| End bp | 1060631 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637969460 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_576270 |
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| Protein GI | 92116541 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGAGAA TACTGTTCAT CGGTGCCCTG CTCAGCAGCG GGTCGTATGG CACGCTGGCC
GTGGCGCAGG ATTCGCAGGA TTCAAAGAAG CTTCCGCCGG TGACCGTTAC CGCCGACGGC
CAGCCGAAAA ACGTGCAGCA GAACGGGAAA AAGAATACGC GGGGCCGGAC CGCGCGACGT
TCGCGTCAGG CTGCGCCGCA AAATCAACAA CCGGCGCAGC AGCAACAGCA ACAACAGCAA
CCCGTCGGTG TGCTGGCGCC GCAAAACCAG ATTCTCAGCA CCGCCCCGCG GCCGGCTGGT
GCCAGCAGCG TAACACCGCA GGGCATCGCC ATTCTCGGCG GCCCCGCGCA GACCAGCTTC
TACCAGGCAT TGACCATGAC GCCGTCGGTG CTGGTTGAAA GCCCTGATCC GTACGGTCTC
AGCCCGACCC GCAATATCAA TATTCGCGGT AAGGGCGACT TCCATCTCTC TAAAAATATC
GAAGGATTGC CGCTGATGGG CATCGTCGGC GGCACCGACC TCTACGATTT GGAAAACATC
CGCAGGATCG ACATCTACCG CGGCGCGGTA CCATCCGATC AAAGCCTTGG TCTGTCGAAT
GCTTCAGGCG TCATCAACCA GCTTATTCTC GGCCCGCAAG ACAAAGCGGG GGTCACGGGC
CGGCAGGCAT TCGGTAGCGA CAGTTTCTAC AAGACATTCG TTCGTGTCGA TACAGGGCTG
TTGCCGGAGA CGGGGACCAA GGCGTTTATG TCCTTATCAA ACATCGGTGC AGACAAATGG
AAGGGTGCTG GTGATAACGA GCGCCAGAAC GTAACCCTTG GCATCAATCA GGCGATCGGC
GAACGCATTA CGGTGGACGT CAACGCCGTC TACAACAAGT TCGACGGCAA TGCCTACCGC
GGGCTGAGCT ACGCCCAGAC GCAGGATATC CGCCACAACT ACATGTTCGA CTACAACACG
GTGCTGACGG GCAATCCGGC GACCGACGTG AACTATTACA AATACAATCG TACCACCGCC
GAGGATTTCG CGGTCCTTGC CAAGGTCGAT TACAACTTTG CGCCAGGCCA GCATCTGCTG
TTCAAGCCGT ATTTCTGGAA CAACAACGGC TACAACTATT CGGCTGCAGG CAATCAGGTG
CAGATCTGGC GTCAGCAGAA CCAGAACATC GGCAATGTCT TCGAGTATAC GGGCAAGTTT
GCGACCGGGA CGGACGTGGT CGCCGGCTAT TGGTGGCAAT CGGTGCAACC GCCGCCGCCG
CCTACAGACC AGCGTCGCTT CACCGTCAAT GCCGGCAATC TGGTTTTCGC CAACTGGCAG
AGCCTTGCCA AAATCGACGA CTTTTCGGTC AACAGTCCAT ACTTCCAGGT CTCGCAACAG
TTCGGTGCTA CTTTCGTGAC CGCCGGCGTG CGCTACATGA TCCTGGGCGC GCCGCACATG
CAATACTTCA ACACGGCGGG CATTCCCGAC GGCACCTACG ATCAAGCACT GGCGACCAAT
CCGGCACTCT ATCCCGATGC AAACGTACAG GCTCGCGACT ATACCGCCTG GCTACCTAAC
ATCGCCGTCC GGCAGGATCT GAACTCGGTC CTGAGCGCCA ACGTCTCCTA CGGCCGCAGG
TTCGGACGCC CGGACTGGGG TCCGCAGGCA AGCAATTATA TCTCCAACCG CACCACCTTC
CTCGGCAAAG GCTATACGCT GCAGACGCTG GTGGACAAGG TTCGGCCGGA GATCGCGGAC
CAGTTCGATG CGTCGCTGCG GTACAGCAAC AACGGCCTCA CCATCGTCCC GGGCGTATTC
TACGCCAAGC ATCAGAACAA GCAGGTCAAG ATCGTCGACC CGACGATCGG GCCGAACATC
GCCTATTATC AGGGCACAGG CTCAAGCACT GAATATGGCG CCGAACTCGA AGCGTCATAT
GCGCTAACCG GGCGTTTGGC CGTGTTTGGC ACCGGCACAT GGGTTTCGGA GACGTTCGAC
TCCGACACGC CGACACTCAG CGGCGGCGCC ACGCTGGCGA CCAAGGGCAA GCAAATCCCC
AACGCGCCGC AAGTCATGGT GAAGGGCGGC GTCACCTATC AGTGGGACGG TCTCTCCATC
TCGCCGATCG TCCGATACAT CGGCCCGCGC TACGGCGATG CCGCGAATAC GCAACGCGTC
CCGGGGTACA CGGTGGCCGA CTTCACAGCA TCCTATGACC TTGGCAGGCA CCTCGGCATC
GAAAGCGTAA AAGCGAGCTT CTCAGTGCTC AACATCTTCG ATCGCCGCTA CGTCTCCCAA
ATCTCGCCGA ACGATACTGA TCTCAGCGCA GGCGCCAATT ACTACGCTGG CGCGCCGCGA
ACGGTAGTGG GATCGCTGTC GATTAGGTTC TGA
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| Protein sequence | MKRILFIGAL LSSGSYGTLA VAQDSQDSKK LPPVTVTADG QPKNVQQNGK KNTRGRTARR
SRQAAPQNQQ PAQQQQQQQQ PVGVLAPQNQ ILSTAPRPAG ASSVTPQGIA ILGGPAQTSF
YQALTMTPSV LVESPDPYGL SPTRNINIRG KGDFHLSKNI EGLPLMGIVG GTDLYDLENI
RRIDIYRGAV PSDQSLGLSN ASGVINQLIL GPQDKAGVTG RQAFGSDSFY KTFVRVDTGL
LPETGTKAFM SLSNIGADKW KGAGDNERQN VTLGINQAIG ERITVDVNAV YNKFDGNAYR
GLSYAQTQDI RHNYMFDYNT VLTGNPATDV NYYKYNRTTA EDFAVLAKVD YNFAPGQHLL
FKPYFWNNNG YNYSAAGNQV QIWRQQNQNI GNVFEYTGKF ATGTDVVAGY WWQSVQPPPP
PTDQRRFTVN AGNLVFANWQ SLAKIDDFSV NSPYFQVSQQ FGATFVTAGV RYMILGAPHM
QYFNTAGIPD GTYDQALATN PALYPDANVQ ARDYTAWLPN IAVRQDLNSV LSANVSYGRR
FGRPDWGPQA SNYISNRTTF LGKGYTLQTL VDKVRPEIAD QFDASLRYSN NGLTIVPGVF
YAKHQNKQVK IVDPTIGPNI AYYQGTGSST EYGAELEASY ALTGRLAVFG TGTWVSETFD
SDTPTLSGGA TLATKGKQIP NAPQVMVKGG VTYQWDGLSI SPIVRYIGPR YGDAANTQRV
PGYTVADFTA SYDLGRHLGI ESVKASFSVL NIFDRRYVSQ ISPNDTDLSA GANYYAGAPR
TVVGSLSIRF
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