| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0921 |
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| Symbol | |
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| ID | 4031915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1017473 |
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| End bp | 1018819 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637969429 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_576239 |
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| Protein GI | 92116510 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCA GTTTCGATCC TGTCGCCGCC AATTCCAACA GTGCCAACGT GACGCCCGGC
TATATGTCAG GCTTTGGCAA TAGCTTCGAG ACCGAAGCTC TGCCGGGCGC CTTGCCGATC
GGGCGTAATT CACCTCAACG CTGCGCCTAC GGATTGTACG CGGAACAATT GTCCGGCTCG
CCGTTCACCG CGCCGCGCGG CGCCAACGAA CGCTCGTGGC TTTATCGGAT CCGCCCCTCG
GTTCGTCATT CCGGGCATTT CGTTAAAATC GACGCAAAAC TCTGGCGCAC GGCGCCGTGC
CTCGAGCACG ACATGCCGCT CGCGCAACTA CGCTGGGACC CCACGCCGAT TCCAGAGGAC
GAACTGACTT TCGTGCAGAG CGTGCGAACG ATGACCACCG CCGGCGACGC CCACACCCAG
ACCGGCATGG CCGCGCATAT CTATCTCATT ACGAGATCCA TGGTCGATCA GCATTTTTAC
AATGCCGATG GCGAGATGCT GTTCGTACCG CAGGGGGGCA GCCTTCGCTT CGTCACCGAA
TTCGGCGTGA TCGACACCGA GCCGGGCGAA ATTGCCGTTA TTCCGCGCGG CGTCAAGTTT
CGCGTCGAAA TTCCATCCGG CCCCGCGCGC GGTTATCTGT GCGAGAACTA CGGCGGCGCA
TTCACACTGC CTGAACGGGG CCCCATCGGC GCAAATTGTC TTGCCAATTC ACGCGACTTT
CTCACCCCTG TTGCCGCTTA TGAGGATGAT GACAAGCCAA CCGAGTTGTT CGTGAAATGG
GGTGGAGCGT TATGGTCCAC GGCTCTGCCT CACTCGCCGA TTGATGTCGT GGCATGGCAC
GGCAATTATG CGCCCTATAA GTACGATTTA AGGACGTTCT CACCAATCGG TGCAATCGGA
TTCGATCACC CCGATCCATC GATCTTCACC GTGCTGACGT CGCCTTCAGA AATCGCCGGC
ACCGCGAATA TCGATTTCGT GATTTTCCCG GAGCGATGGG TGGTCGCAGA GAACACGTTC
CGTCCACCTT GGTATCATAT GAACGTCATG TCCGAGTTTA TGGGCTTGAT TTACGGCGTT
TACGACGCCA AGCCGCAGGG CTTCGTACCT GGCGGCATTA GCCTGCATAA TTGCATGCTT
CCTCACGGGC CCGACCGCGA GGCGTTCGAC CATGCCAGCA ATACCGAACT CAAGCCCGTC
AAGCTTACCG GCACGTTGGC CTTCATGTTC GAAACACGCT TCCCGCAGCG CGTGACTGAA
TACGCCGCAA CATCCGACGC GCTGCAGGAC GACTACGCGG ATTGTTGGCA AGGGCTTGAG
CGCCGTTTCG ATCCGACCAG GCCGTAA
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| Protein sequence | MNTSFDPVAA NSNSANVTPG YMSGFGNSFE TEALPGALPI GRNSPQRCAY GLYAEQLSGS
PFTAPRGANE RSWLYRIRPS VRHSGHFVKI DAKLWRTAPC LEHDMPLAQL RWDPTPIPED
ELTFVQSVRT MTTAGDAHTQ TGMAAHIYLI TRSMVDQHFY NADGEMLFVP QGGSLRFVTE
FGVIDTEPGE IAVIPRGVKF RVEIPSGPAR GYLCENYGGA FTLPERGPIG ANCLANSRDF
LTPVAAYEDD DKPTELFVKW GGALWSTALP HSPIDVVAWH GNYAPYKYDL RTFSPIGAIG
FDHPDPSIFT VLTSPSEIAG TANIDFVIFP ERWVVAENTF RPPWYHMNVM SEFMGLIYGV
YDAKPQGFVP GGISLHNCML PHGPDREAFD HASNTELKPV KLTGTLAFMF ETRFPQRVTE
YAATSDALQD DYADCWQGLE RRFDPTRP
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