Gene Nham_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0920 
Symbol 
ID4031914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1016813 
End bp1017457 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content57% 
IMG OID637969428 
Productmaleylacetoacetate isomerase 
Protein accessionYP_576238 
Protein GI92116509 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACA ACGACGCTTT GCTATACGGA TACTTCCGGT CAACCGCAGC CTACCGCGTC 
CGCATCGCGC TCGGACTCAA GGGATTGAGA GCGGAGAACA AATTCGTACA TTTGCGCAAA
GGCGAACAAA TCCAGCAGGC CTACCGCGAC ATCAACCCAG CTGGACTGGT GCCCTATTGG
ATCGAAGGTG ACTTTCGCCT GGCTCAGTCA CTCGCGATCA TTGAATATCT CGATGAAACG
CACCCGGCGC CCCCGCTGCT GCCATCTAGT CCGAAAGCAC GCGCTGTCGC GCGAGAAATC
GCGCTGGTGG TGACAAGCGA CATTCATCCG ATCGGAAGTC TCCGTGTTTT GAATCGGCTG
GCCGAAATGG AAGTCAATGA GACCGCCCGC ACGACATGGT CGCAGCACTG GATCAGAGTC
GGATTCGAAG CGATCGAAGC ACGCCTTGCG CACCTTCCGG GCCCCTTTGC GCTCGGTGAA
CGGCCGACGG TAGCCGATAT TTGCATTGTC CCGCAGGTGT TCAATGCGCG ACGCTTCGGT
GTTGATCTTT CCCCGTACAA ACGAATCCTG GAAATAGATG CGACAGCGTC GGAGCTCGAG
GCATTTGCCA CGGCTGAGCC AGGCCGTCAG CCCGATGCAG AATAG
 
Protein sequence
MNNNDALLYG YFRSTAAYRV RIALGLKGLR AENKFVHLRK GEQIQQAYRD INPAGLVPYW 
IEGDFRLAQS LAIIEYLDET HPAPPLLPSS PKARAVAREI ALVVTSDIHP IGSLRVLNRL
AEMEVNETAR TTWSQHWIRV GFEAIEARLA HLPGPFALGE RPTVADICIV PQVFNARRFG
VDLSPYKRIL EIDATASELE AFATAEPGRQ PDAE