Gene Nham_0867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0867 
Symbol 
ID4031416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp961412 
End bp962062 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content61% 
IMG OID637969383 
Product3-oxoacid CoA-transferase, subunit B 
Protein accessionYP_576193 
Protein GI92116464 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID[TIGR02428] 3-oxoacid CoA-transferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCGC AGACAGTCAT CGCCCGGCGT GTCGCAAAAG AACTACATGC CGGTGCCCTT 
GTGAATCTGG GGATCGGCAT ACCGACGCTG GTCGCCAACT ATGTTCCGTC CGAGCTCAAG 
GTATTCTTCC AATCGGAAAA CGGATTGATC GGTACCGGAC CTATACCGGA ACAAGGCTTG 
GCTCACCCGC TTCTGACGGA TGCGGGCGGG CGCCCGATCA GCGCCCTGCC GGGCGCCAGC 
ACCTTCGACA GCGCGATATC CTTTGGATTG ATCCGCGGCG GCCATGTCGA TGTGACGGTG 
CTGGGCGGCC TCCAGGTCGA TACGCATGGA CATCTCGCGA ACTGGATGAT CCCCGGCAAG 
ATGGTGCCGG GGATGGGCGG AGCGATGGAT CTCGTGAGTG GCGCCAAGCG AGTTATCATC 
GCTATGCAGC ACGCCGCGAA GGGCAAATCG AAGATCGTCA GCAAGTGCAC TCTGCCGCTC 
ACTTCGACAA GGCCGGTGAG TTTGGTCGTC ACCGACATGG CTGTCATCGC TTTCCCGGAA 
GGTCGGGCGA CGTTGCTGGA AACCGCACCG GGTATCAGCG TGGCCGAGGT TGTGGCTGTG 
ACAGACGCCG AGCTTGTCAT CCCCGACACC GTCCCCGAGA TGAAAATCTG A
 
Protein sequence
MDAQTVIARR VAKELHAGAL VNLGIGIPTL VANYVPSELK VFFQSENGLI GTGPIPEQGL 
AHPLLTDAGG RPISALPGAS TFDSAISFGL IRGGHVDVTV LGGLQVDTHG HLANWMIPGK 
MVPGMGGAMD LVSGAKRVII AMQHAAKGKS KIVSKCTLPL TSTRPVSLVV TDMAVIAFPE 
GRATLLETAP GISVAEVVAV TDAELVIPDT VPEMKI