Gene Nham_0716 details

Gene Information

• Locus tag: Nham_0716
• ID: 4031515
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 791806
• End bp: 792441
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637969250
• Product: TetR family transcriptional regulator
• Protein accession: YP_576061
• Protein GI: 92116332
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.281964
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCACAC AAACCGGCAC AACGGCCAAA CCCCCAAACC GTGCAGCGGG CGTGGCGCAG 
CGGCGCGCGG CGATCATCGC GGCGGCCCTT GATGAATTCA CCGCGCGTGG TTTTGCTGCC 
ACCCGTCTGG ACGACGTGGC AAAGCGGGCA GGGGTCGCCA AAGGCACGAT TTATCTGCAC 
TTCAAGGACA AGGAGGCGCT GTTCCAGGAC CTGGTGAGAA CGGCGCTCGT GCCGCTGATC 
GGAAATCTGA CGGCCGTGCC TGCTGCTGGT GGATCGGTAC GCGAGATGCT CGAACGCTTT 
GCCGAGGCTT TTGTGCGCGA TGTTGCCGAG ACCAAGCGCG GCGATATCGT TCGCTTGATC 
ATGGCGGAGG GCACACGCTT TCCGTCGCTC GCCGATTTCT ACTTTCGTGA AGTCGTTTCG 
CGCGGCCTCG CGGGCATGCG CAAGCTGATC GAGTACGGTA TCGCGCGCGG AGAAATCCGC 
AATGCGCGCC TTGCCGATTT TCCCCAGATC GTCGTCGCGC CTGCCATGAT CGCCGTGATG 
TGGCAGGGCC TGTTCGTCCG GCATGCGCCG CTCGATGCCG TGGCGATGCT GAAGGTCCAT 
CTCGATCTGA TTTTTGGCGA ACGGAGAGTT TCATGA 

 

Protein sequence

MSTQTGTTAK PPNRAAGVAQ RRAAIIAAAL DEFTARGFAA TRLDDVAKRA GVAKGTIYLH 
FKDKEALFQD LVRTALVPLI GNLTAVPAAG GSVREMLERF AEAFVRDVAE TKRGDIVRLI 
MAEGTRFPSL ADFYFREVVS RGLAGMRKLI EYGIARGEIR NARLADFPQI VVAPAMIAVM 
WQGLFVRHAP LDAVAMLKVH LDLIFGERRV S