| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0642 |
|---|
| Symbol | argD |
|---|
| ID | 4031221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 703690 |
|---|
| End bp | 704901 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637969173 |
|---|
| Product | acetylornithine transaminase protein |
|---|
| Protein accession | YP_575990 |
|---|
| Protein GI | 92116261 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
|---|
| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGAG CCGCGCCGTC CCATCTGTTG CCCGTTTTCG CAAGAGCCGA TCTCTCATTC
GAGAGCGGCG AGGGCGCGTG GCTGGTCGGC TCCGACGGCG GACGCTATCT CGACTTCACC
AGCGGCGTTG CTGTGAACGC GCTTGGCCAC TGCCACCCGC ACCTCGTCGC CGCGCTTCAG
GCGCAGGCGG CAAAGCTCTG GCACGTCTCG AATCTGTTCA AGTCGCCGGA CGGCGAGCGG
CTGGCGGCGC GGCTGTGCGA GCAGAGCTTT GCCGACTTCG CCTTCTTCGC CAATTCCGGC
GCCGAGGCGG TGGAGTGCGC CATCAAGGTT GTGCGCCGCT ATCATGCCTC CAAAGGTCAT
CCGGAACGCT ATCGCCTCGT CACCTTCGAG GGCGCCTTCC ATGGCCGCAC GCTGGCGGCG
CTGGCGGCGA CCGGCTCGAA AAAATATCTC GACGGGTACG GGCCGCCGAC GGACGGCTTC
GACCAGGTGC CGATCGACGA TATCGAGGCG GTGAAGAAGG CGGTCGGCCC CGCGACCGCC
GGCATTCTGA TCGAGCCGCT GCAGGGCGAA GGCGGCGTGC GCGAGCCGTC CCATGCGTTC
TTCCGGGCGC TGCGCCAGTT CTGCGATGAA CGCGGTCTGC TGCTGGCGTT CGACGAGGTG
CAGACCGGCA TGGGTCGCAC CGGCGATCTC TTTGCTTACA GGCGCATCGG CGTCGCGCCG
GACGTGATGT CGCTGGCGAA GGCGCTCGGC GGCGGTTTTC CGATCGGCGC CTGTCTTGCG
ACCGCGGAAG CCGCGTCCGG CATGACGCCC GGCTCGCACG GCTCGACCTT CGGCGGCAAT
CCGCTGGCGG TCGCCGCGGC CAATGCCGTG CTCGACGTGA TGCTGGAGCC CGGCTTCTTC
GAGCGGACGC GGAAGATGTC GCTGCTGCTG AAGCAGAAGC TGGCCTCGGT CGTCGATCGC
CATCGGGATG TGCTGAGCGA GGTGCGCGGC GAGGGACTTT TGATCGGCCT CAAGGCCGTG
GTGCCGTCGG GCGATCTGGT CGGCGCGCTG CGCGAGGAGA AGCTTTTGAC GGTCGGCGCC
GGCGACAACG TCGTGCGTTT GCTGCCGCCG CTGATCGTCA GCGAGGTTGA GATCGAGGAG
TCGGTGCGGC GGCTGGAGCG GGCCTGCGCC AAACTTTCTG GCGCATCTGC GAAGAAGGAA
GCGGCGCAAT GA
|
|---|
| Protein sequence | MTRAAPSHLL PVFARADLSF ESGEGAWLVG SDGGRYLDFT SGVAVNALGH CHPHLVAALQ
AQAAKLWHVS NLFKSPDGER LAARLCEQSF ADFAFFANSG AEAVECAIKV VRRYHASKGH
PERYRLVTFE GAFHGRTLAA LAATGSKKYL DGYGPPTDGF DQVPIDDIEA VKKAVGPATA
GILIEPLQGE GGVREPSHAF FRALRQFCDE RGLLLAFDEV QTGMGRTGDL FAYRRIGVAP
DVMSLAKALG GGFPIGACLA TAEAASGMTP GSHGSTFGGN PLAVAAANAV LDVMLEPGFF
ERTRKMSLLL KQKLASVVDR HRDVLSEVRG EGLLIGLKAV VPSGDLVGAL REEKLLTVGA
GDNVVRLLPP LIVSEVEIEE SVRRLERACA KLSGASAKKE AAQ
|
|---|
| |