| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0623 |
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| Symbol | |
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| ID | 4031280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 685310 |
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| End bp | 686236 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637969154 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_575971 |
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| Protein GI | 92116242 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.226314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTCAG GACTTTCATC CGCCGATTTC GTAAAACGCC TCGACACGAC GGCGGACGAG
ACCGAGACCC TGCTGGGAAC GTTGCTGTCC GATGCGGTCT TGCCAGACGA GATCGCACGC
CCGAAGCGGC TGATGGACGC CATGCGCTAT TCGTCGCTCG GCGGCGGCAA GCGGCTGCGG
CCGTTTCTGG TGGTCGAAAG CTCGGCCGTG TTCGGAGTTC CACGCGACTC CGCGCTGCTG
GCCGGTGCGG CGCTCGAATG CATCCATTGC TATTCGCTGA TCCATGACGA CCTGCCGGCG
ATGGACAACA GCGACCTGCG TCGCGGCCGG CCGACCCTGC ACAAGACCGC CGACGACGCC
ACCGCGATCC TCGCCGGCGA CGGCTTGCTG ACGCTCGCCT TCGACATCAT CACCCGCGAC
GAGGTCCACC AGGATCCGGC CGTGCGCCTG TTGCTGACGC GCGCGCTGGC GCGCGCCGCC
GGCATCGGCG GCATGGTCGG CGGACAGATG CTCGACCTCG CCGGCGAAGG ACGCTTCGGC
GACCGCGAGC CGGTGGATGT GGCGCGTTTG CAGCAGATGA AGACCGGCGC GCTGCTCCGC
TTCGGCTGCA TCAGTGGCGC GCTGCTCGGC CAGGCCTCGC AGAAAGACTA TCAGGCGCTC
GACGCTTACG GCCGCGCGCT CGGCGAAGCC TTCCAGATCG CCGACGACCT GCTCGATGTC
GAAGGCGATG CGGCTGCGCT CGGCAAACCC GCTGGAGCCG ACGCGGCGCT GGGCAAGACC
ACTTTCGTTA CCCAGCTCGG CATCGACGGC GCAAAAAAGC GCGTCCGCGA TCTTCTGGCG
AAGGCGGACG AGGCGCTGTC GGCCTTCGGC GCGCGCGGCG ACGTGCTGCG CGCCGCCGCG
CATTTCGTCG CCGACCGCAA GAACTGA
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| Protein sequence | MTSGLSSADF VKRLDTTADE TETLLGTLLS DAVLPDEIAR PKRLMDAMRY SSLGGGKRLR
PFLVVESSAV FGVPRDSALL AGAALECIHC YSLIHDDLPA MDNSDLRRGR PTLHKTADDA
TAILAGDGLL TLAFDIITRD EVHQDPAVRL LLTRALARAA GIGGMVGGQM LDLAGEGRFG
DREPVDVARL QQMKTGALLR FGCISGALLG QASQKDYQAL DAYGRALGEA FQIADDLLDV
EGDAAALGKP AGADAALGKT TFVTQLGIDG AKKRVRDLLA KADEALSAFG ARGDVLRAAA
HFVADRKN
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