| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0593 |
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| Symbol | |
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| ID | 4030927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 654831 |
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| End bp | 656558 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637969123 |
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| Product | TRAG protein |
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| Protein accession | YP_575942 |
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| Protein GI | 92116213 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTCG AAACTATCGC ATATCTTGGC CTCGGCGTCT CCACCTTTGC GCTCGTCAGC
TGGCGCTCGC AAAAGACCGA GACCACCTTC GGCTCCGCCG AATGGCTCCA GCCATGGGTG
GCCAGCCGCA AGGGGATGTT TCGCAGAGGC GGCCTCGTGC TCGGCGACTG GACCGGCCTT
TCTCCGGTCT ACTATCGCGG CGCGGGTCAC GCGCTCACCG TCGCCCCAAC CGGCTCGGGC
AAGGGCACCT CGGCGATCGT GCCGAACCTG CTGCGCCATC CCTTTATCTT CCTGATCGAT
CCCGGCGGCG AGAACACCGC GATTGCCGCC AAAGTCTGGC GCAAGAAGGG CTACGCGTTC
TCCTGCCTCA ATCCATGGCG GATGCACACG ACAGCACCTT GGTCGCTGCC GTCCCACAGT
CTCAATCCGC TCGGCATCCT CGATTCCGAA AGCGAGACTT TCGCGAGCGA CGCCGACCTG
CTCGCCGACA TGATCGTGAC CCGCACCGGC AGCGAATCCG GCTCGTCCGC TTTCTTCAAG
GACGAAGCGC AAAGCGGCAT CCGCGCCTTC CTGATGCATA TCGTCACCAC CGAGCCGGAA
GAGCGGCGCA CGCTCACGAC CTTGCGCGAA TACATCGCCG CCAACGCCGA GAGTTGGGAC
GCGCTGATAG CCTCCATGAA GACGAACAAG GCGGCAGGCG GCATCGTCGC CCGCGAAGCG
GAGCAGATGG AACGCCGCGA AGCGAACGCG GGCGGCGAGT TCTCGGCGGT GCTGTCCACG
ATGAAGCAGG ACACCAACTT CATCGAAGAT CCAATCATGC AGGCGGCGCT GTCGCGATCG
ACCGTCGATC TCACCGTGCT GAAGGGTCGG CGCGGCAATG AAAAACTGCC GGGCGCGGTG
TTGTCGGTGA TCATTCCGCT GGAATATCTC GACACTCACG CCGCCTATGC GCGCCTGATC
GTCGGCTGCG CCCTATGGAC CATGCAGCGT GGGCCGCTGG CGCGCGAGCG CGTCCTGTTC
CTGATGGACG AGTTTCCAGC GCTGAAGCGC ATGGACCGGA TCGCGGGCGG TCTCGCTACC
TTGCGCAAAT ACCGCGTCTG GCTGTGGCCG GTGATTCAGA ACATTGGCCA GCTCAAGGAG
CTGTACCGCG CCAACTGGCA GACCTTCCTC TCCAATGCCG GCCTGAAAAT GTTCATGGGC
GCGGGCGATC TTGAGACGGC GCAATATATC TCCGAGCTTT GCGGCGATGC CACCATCGAG
GTGACGACGA AGACGCCGGG CGGAGAATCG GTTTCGCCGG CCGTGCGGCG GCTGGTGACG
ATCGAAGAGG TGATGCACGC CAATGGCGGC CAGCAGATCG TCTTCGTCGA TAATCTGAAG
CCGCTGCTGC TGCGCAAGAC GCCGTACTGG AACCGGCCGT CGCTGCGCCG CGCCTTTCAT
CGCAATCCGT ACCAGGCCGG CACGCCGGGG CTTCCGTTCC GCACCCCGTT CGCGGCGCTG
TGTGGCGTGT TCCTGCGCTG CGCCGCATGG CTGGCTGGAC CGCCGCCGTC GGTCGTGGCG
CTGATTTTCT TCGCGCTGGC GACCTGGTCG CATCTCGGAA TCTCGCTCGG GCGAGGGACC
GAAGCGAGCA ATCCCGCATG CCTGTATCTC CAGACCGACG GCGTCAAACG CGGCTACGTG
CGCTCGGCGC AAACGCCGTG TCCGCTATTC ATATTCACCG AACTCTGA
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| Protein sequence | MDLETIAYLG LGVSTFALVS WRSQKTETTF GSAEWLQPWV ASRKGMFRRG GLVLGDWTGL
SPVYYRGAGH ALTVAPTGSG KGTSAIVPNL LRHPFIFLID PGGENTAIAA KVWRKKGYAF
SCLNPWRMHT TAPWSLPSHS LNPLGILDSE SETFASDADL LADMIVTRTG SESGSSAFFK
DEAQSGIRAF LMHIVTTEPE ERRTLTTLRE YIAANAESWD ALIASMKTNK AAGGIVAREA
EQMERREANA GGEFSAVLST MKQDTNFIED PIMQAALSRS TVDLTVLKGR RGNEKLPGAV
LSVIIPLEYL DTHAAYARLI VGCALWTMQR GPLARERVLF LMDEFPALKR MDRIAGGLAT
LRKYRVWLWP VIQNIGQLKE LYRANWQTFL SNAGLKMFMG AGDLETAQYI SELCGDATIE
VTTKTPGGES VSPAVRRLVT IEEVMHANGG QQIVFVDNLK PLLLRKTPYW NRPSLRRAFH
RNPYQAGTPG LPFRTPFAAL CGVFLRCAAW LAGPPPSVVA LIFFALATWS HLGISLGRGT
EASNPACLYL QTDGVKRGYV RSAQTPCPLF IFTEL
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