| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0580 |
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| Symbol | |
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| ID | 4030722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 638076 |
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| End bp | 641291 |
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| Gene Length | 3216 bp |
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| Protein Length | 1071 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637969111 |
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| Product | helicase-like |
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| Protein accession | YP_575930 |
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| Protein GI | 92116201 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.254655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGATTC TCACCAACGC CGGTAATGAC CGCGTCATTG ACCAATTGCG CGCCTGGCTT
GCTTCCGGCG TGGCGACGGT CGATTTGATG TCGCCCGACT TCTCCCTGCA TGCCTTTGCC
GAGGCGCGGG AGATGTTGGA AAAGGTCTCT GCCGCTCGGC TGCTGCTCGG AAAAGACGCG
ATGGGCGGCC AGTCGTTTTT CGGCGGTCCT TCCGATATTT CCTATCGTAA CAAGCTTCAA
GGGCGCTGGC TCGCAAGGAA CGCCCATGAC TGGATAAAGG GCAGCGCGGA AGTCCGTCAT
ACGGTTGCAT CCCCGCCGCA ATCGCTGATC GCCATGAAAG GCGAAACGCA GCGCCATGCT
GTTCTTGGCA CCTGCTCTTT CACAACGGAA GGGCTCGGCA TCACCCCTGG CAGCCAGCTT
GGACTGATGC AGGCGAGCGA TACACAAGAA GAAGCCGCTG CTTTTGCCGC ATGGTTCCAA
TCAACATGGG AATCCCTGAA ACAACACGCG GGAAAAGACC AGCTTGCGAC GCTGCTCGCG
GAAACCGCCT CGCAGCGCGC GCCGTCCTTG CTCTATTTCA AGTTCCTGTT CGAACTGTTC
AAGGATTTGG GCGATGAATT GGACGAGGAG CGCATCGTCA AATCCGCTAC CGGCATCCGC
AATACGACCG TGTGGAAGAA GCTGTTCAAA TTCCAGCGCG ACGGCGTCGT CGGCGCGATC
GACAAGCTGG AGCGCATTGG CGGCTGCATC ATCGCCGACA GCGTCGGTCT CGGCAAAACC
TTCGAGGCTT TGGCCGTCAT CAAATACTAT GAGCTTCGCA ACGATCGCGT CCTGGTCCTG
TGTCCCAAGC GGCTGCGCGA CAACTGGACC CTCTACAAGG CCAACGATAA CCGCAACATC
CTTGCTAGCG ACCGCTTCAA CTACGACGTT CTCAATCACA CCGACCTGTC GCGTGACGGC
GGCTTGTCGG GCGACATCGA CCTAACGCAT GTCAACTGGG GAAACTATGA CCTCGTCGTG
ATCGACGAGT CGCATAATTT CCGCAACAAG GCGACGCACC GCGATCGCGA TACTCGCTAC
GACCACCTGA TGAAGCGGAT CATCAAGGCA GGCGTGAAGA CCAAGGTGCT GATGCTCTCC
GCGACGCCGG TCAACAACCG GCTTGCCGAC CTCAAAAACC AGATCGCCTT CATGACGGAA
GGCAGTGACA TCGCGCTCAT CGATCACGGT ATTTCCAGCA TTGAGGCGAC GATCCGCAAG
GCGCAGGGGC AGTTCAACCG TTGGCTCGAC CTGCCAGCAG ATGAGCGCCG GCCGTCGCGC
CTCATGGATA TGCTCGGCTT CGATTACTTC AAGTTGCTCG ACATGCTGAC CATCGCCCGG
TCGCGCAAGC ATGTGCAGCG TTATTACGGC ACCGCCGAAA CCGGGCAGTT TCCCGAGCGG
CTGCGGCCGA TCAACATCAA GGCCGACGTG GACCTTGCCG GCGAGTTCCG CCCGATCCGC
GAGATCAACA ACGAAATCAG ACGGCTGACG CTCGGCGCAT ATGCGCCGCT GCGCTATGTG
CTGCCGCACA AGCAGGCGGC CTACGACGCG AAATACAGCA CCAAGATTCG CGGCGGCGAG
AGCACTTTCC GGCAGGTGGA CCGCGAGGAA AGCCTGATCC ATCTGATGCG CGTCAACCTC
TTGAAGCGCA TGGAAAGCTC GGTCGCCTCC TTTGCTCTCA CCATCAAGCG CCAGCTTGAC
GATGTGAACG CGCTCCTCGC CAAGATCGAC TCCCACGACG AAGCCGTCGA TGAATTGTCC
ATCGACGATG TGGACGTCGA CGACTCGGCG TTCGAGGCGC TGCTTGTCGG CCGCAAGGTC
AAGGTGCTGT TGCAGGATGT TGACCGCGTT CGCTGGCGGC AAGACCTGAT CGAGGATCGC
AACCGGCTGG CGACGCTGCT CTCGGCGGCT CGCGCCGTGA CCGCCGATCG GGATGCCAAA
CTTGCCGCGC TGAAAGAATT GATCGCCCGG AAGGTTCATA CCCCGATCAA TGACGATAAC
CGCAAGATTC TCCTGTTCAC AGCGTTCGCC GATACCGCCG ACTATCTTTA TCGCGAGCTT
GCGCCATGGG CGCGATCGAG CCTCGGCATC AACGCCGCCG TCGTCACCGG CACCGGGGCG
AACAAGACGA CCCTCACAGG CTTGCGCTCC GACATGAGTT CGATCCTGAG CGCGTTTTCG
CCGCGCTCCA AGGAGCGGCC GGCGGAACTG GCGGGAGAAG GGGAGATCGA CCTTTTAATT
GCTACCGACT GCATTTCCGA AGGCCAGAAC CTTCAGGATT GCGACTTTCT CATCAATTAC
GACATCCACT GGAATCCGGT TCGCATCATC CAGCGCTTCG GCCGTATCGA CCGTATCGGC
TCGATCAACG AGCGCATCCA GCTCGTGAAT TTCTGGCCCA ACATGGAGCT GGACGAGTAT
CTCGACCTCG AATCCCGTGT CAGCGGGCGC ATGGTGCTGC TCGACGTTTC CGCCACAGGG
GAGGAAAACG TCATCGAGTT CCAGGCCGGC AACCAGATGA ACGATCTGGA ATACCGCCGC
GCCCAGTTGC AGAAAATGCA GGATGCCGTC ATCGACCTAG AGGATCTGTC GAGCGGCGTT
TCCATCGCCG ATTTGACACT CAACGATTTT CGGATCGACC TGTCCGGTTA TCTGCGGGAA
AATCGCGACC GTCTCGAAAC CTTGCCGCTC GGCACCTATG CCGTCGTTTC GATGCCCGAG
GACAGTTCCG GCAACAACGA AAATGCTATC CCGCCGGGAG CAATCTTCTG CCTCAAGGCT
GTCGGCGAGG CGGCGGACCG CGCGGCCGAA CCGGGCTACC CACTCAGCCC GCATTTCGTC
ATCCATGTCG GCGACGGGGG CGACGTGCTC TTGCCCTACA CCCAGGCCAA GCAGGTGCTC
GACCGGCTGA AGAAACTCAG CATCGGACGC GATCTTCCCG ACACGCAAGC CTGCGGGCGT
TTCGACAAGG CGACCCGGTT CGGCCGCGAC ATGGAGCCGT ATCAGAAGCT CTTGTCGCGT
GCGGTCGCCT CGATTGCTGG CAAGAGCGAG GAACGCGCCG TCGCCAGCCT GTTTTCGCCG
GGCGGCACCC ACGCGCTGAA GGGCGAGTTC GCAGGGATCA ACGATTTCGA GGTTGTGGCC
TTCCTCGTCA TCCTGCCCGA AGCGGGGACG GCATGA
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| Protein sequence | MRILTNAGND RVIDQLRAWL ASGVATVDLM SPDFSLHAFA EAREMLEKVS AARLLLGKDA
MGGQSFFGGP SDISYRNKLQ GRWLARNAHD WIKGSAEVRH TVASPPQSLI AMKGETQRHA
VLGTCSFTTE GLGITPGSQL GLMQASDTQE EAAAFAAWFQ STWESLKQHA GKDQLATLLA
ETASQRAPSL LYFKFLFELF KDLGDELDEE RIVKSATGIR NTTVWKKLFK FQRDGVVGAI
DKLERIGGCI IADSVGLGKT FEALAVIKYY ELRNDRVLVL CPKRLRDNWT LYKANDNRNI
LASDRFNYDV LNHTDLSRDG GLSGDIDLTH VNWGNYDLVV IDESHNFRNK ATHRDRDTRY
DHLMKRIIKA GVKTKVLMLS ATPVNNRLAD LKNQIAFMTE GSDIALIDHG ISSIEATIRK
AQGQFNRWLD LPADERRPSR LMDMLGFDYF KLLDMLTIAR SRKHVQRYYG TAETGQFPER
LRPINIKADV DLAGEFRPIR EINNEIRRLT LGAYAPLRYV LPHKQAAYDA KYSTKIRGGE
STFRQVDREE SLIHLMRVNL LKRMESSVAS FALTIKRQLD DVNALLAKID SHDEAVDELS
IDDVDVDDSA FEALLVGRKV KVLLQDVDRV RWRQDLIEDR NRLATLLSAA RAVTADRDAK
LAALKELIAR KVHTPINDDN RKILLFTAFA DTADYLYREL APWARSSLGI NAAVVTGTGA
NKTTLTGLRS DMSSILSAFS PRSKERPAEL AGEGEIDLLI ATDCISEGQN LQDCDFLINY
DIHWNPVRII QRFGRIDRIG SINERIQLVN FWPNMELDEY LDLESRVSGR MVLLDVSATG
EENVIEFQAG NQMNDLEYRR AQLQKMQDAV IDLEDLSSGV SIADLTLNDF RIDLSGYLRE
NRDRLETLPL GTYAVVSMPE DSSGNNENAI PPGAIFCLKA VGEAADRAAE PGYPLSPHFV
IHVGDGGDVL LPYTQAKQVL DRLKKLSIGR DLPDTQACGR FDKATRFGRD MEPYQKLLSR
AVASIAGKSE ERAVASLFSP GGTHALKGEF AGINDFEVVA FLVILPEAGT A
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