| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0568 |
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| Symbol | |
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| ID | 4030710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 628229 |
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| End bp | 629872 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637969099 |
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| Product | recombinase |
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| Protein accession | YP_575918 |
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| Protein GI | 92116189 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.816013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCCG TCGCCGTTAC TGCCAGTCAG CCAGCATCAC GCGCGGCGCT CTATCTGCGC
GTCTCGACCG GGCGTCAGGC CGAAAGCGAC CTGTCGATTC CCGATCAGCG GCGGCAAGGT
ATCGCGTTCT GTAAGGCGCG CGGCTGGGAA GTTGCCGCCG AGTTTGTCGA TGCGGGGTTG
TCCGGCACCG ATGACAAGCG CCCGGAATTG CAGCGCCTGC TCGACTTGGC CACGTCGGAC
GGCTCGCCGT TCGACGTGAT TATCGTCCAT TCCTTCAGTC GTTTCGCTCG TGATCACTTC
GCACTCGAAT ACCATGTGCG CCGGCTGCGT AAGTCCGGCG TGCGGCTGGT GTCGATGACG
CAAGACCTCG GCGACGATCC GATGAGCGTC ATGGTGCGGC AGGTCTTTGC CCTGTTCGAC
GAATACCAAT CGAAGGAAAA CGCCAAGCAC GTCCTGCGCG CCATGCAGGA AAACGCCCGG
CAAGGATTCT GGAACGGCTC GGCCGCCCCG TTCGGCTATC AGGTCGTTGC TGCCGAACAG
CGCGGCGCGA AAACCAAGAA GAAGCTCGCC ATTGACCCGG TCGAAGCCGA GACCGTCCGC
CTGATCTTCC GCCTGTTACG CGAAGGCGAC GGCACAATAG GGCCGATGGG CGTGAAAGCC
GTCGTCGTCT GGCTCAATGG CCACGGCTAT CGCACAAGGC GCGGTGCGCG GTGGGGCATC
GGCCCGCTGC ATAAGCTTGT GACCAATCCG GTCTATAAGG GCGAAGCGCA TTTCAATCGC
ACCGATTCCA AGACCCGGAC GGCAAAGCCT GCGACCGAGC ATATCATCGT GCCCGTCGAT
GCGATCATCG ATCCGGCAAT CTTCGACGCG GTGCAGGCGC AGCTCAAAGC GCGCAATCCG
AAGGTCGCGC CGCCGCGCGT TGTGACCGGA CCGATCCTGC TGACCGGCCT TGCCACCTGC
GCGACCTGCG GCGGCGGCAT GACGATCCGC ACCGGAAAAT CGGGCCGCTA TCGCTACTAT
GTCTGCGCGG CGGCGGCTCA GAAGGGCAAG GATGCCTGCC CAGGCCGCTC GCTGCCGATG
GAACGCCTCG ACAATGTTGT AACCGACCGT ATCGGCGAGC AACTGCTGAC GCCGGAGCGC
GTTGCCGAAT TGCTGCGCGG CCTGATGAAC CGTCAGACCA AGCGCGATGA CGATCTTGCA
GGTCGCCTCA CAGCCTTGCG CGCGAAACTC ACCGACGCGG AGGGCCGGCT TAACCGCCTG
TATCAGGCCA TCGAGAACGG CATCGCCGAT CCGAACGATG CGACGCTGAA AGATCGCGTC
GCAGCAATCA AAACCGAACG CGATATTGCC AAGGCCGCCT TCGACCGAGC AGTCTCCGAA
ATGCGCCCGG AAGCCCGGAT CACCGAAGAC AAGATCGCTT CCTTCGTCGC CACCATGCGC
GACAACGTGC TGTCGGGCGA AACCGCCTTT CGCCGCGCCT GGCTGCGCTC GGTCATCGAC
AAGGTGGAGG TGGACGACAC GGAAATCCGT ATTCACGGTC GCAGGACCGT GCTCGAACGG
CTAGTGATGG GGGGAGGGGC GGCACCGGCA GGAGTGCCCA GTTTTGTTCG TGAGTGGCGC
ACCAGACACG ATTCGAACGC GTGA
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| Protein sequence | MKAVAVTASQ PASRAALYLR VSTGRQAESD LSIPDQRRQG IAFCKARGWE VAAEFVDAGL
SGTDDKRPEL QRLLDLATSD GSPFDVIIVH SFSRFARDHF ALEYHVRRLR KSGVRLVSMT
QDLGDDPMSV MVRQVFALFD EYQSKENAKH VLRAMQENAR QGFWNGSAAP FGYQVVAAEQ
RGAKTKKKLA IDPVEAETVR LIFRLLREGD GTIGPMGVKA VVVWLNGHGY RTRRGARWGI
GPLHKLVTNP VYKGEAHFNR TDSKTRTAKP ATEHIIVPVD AIIDPAIFDA VQAQLKARNP
KVAPPRVVTG PILLTGLATC ATCGGGMTIR TGKSGRYRYY VCAAAAQKGK DACPGRSLPM
ERLDNVVTDR IGEQLLTPER VAELLRGLMN RQTKRDDDLA GRLTALRAKL TDAEGRLNRL
YQAIENGIAD PNDATLKDRV AAIKTERDIA KAAFDRAVSE MRPEARITED KIASFVATMR
DNVLSGETAF RRAWLRSVID KVEVDDTEIR IHGRRTVLER LVMGGGAAPA GVPSFVREWR
TRHDSNA
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