Gene Nham_0568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0568 
Symbol 
ID4030710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp628229 
End bp629872 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content63% 
IMG OID637969099 
Productrecombinase 
Protein accessionYP_575918 
Protein GI92116189 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.816013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCG TCGCCGTTAC TGCCAGTCAG CCAGCATCAC GCGCGGCGCT CTATCTGCGC 
GTCTCGACCG GGCGTCAGGC CGAAAGCGAC CTGTCGATTC CCGATCAGCG GCGGCAAGGT
ATCGCGTTCT GTAAGGCGCG CGGCTGGGAA GTTGCCGCCG AGTTTGTCGA TGCGGGGTTG
TCCGGCACCG ATGACAAGCG CCCGGAATTG CAGCGCCTGC TCGACTTGGC CACGTCGGAC
GGCTCGCCGT TCGACGTGAT TATCGTCCAT TCCTTCAGTC GTTTCGCTCG TGATCACTTC
GCACTCGAAT ACCATGTGCG CCGGCTGCGT AAGTCCGGCG TGCGGCTGGT GTCGATGACG
CAAGACCTCG GCGACGATCC GATGAGCGTC ATGGTGCGGC AGGTCTTTGC CCTGTTCGAC
GAATACCAAT CGAAGGAAAA CGCCAAGCAC GTCCTGCGCG CCATGCAGGA AAACGCCCGG
CAAGGATTCT GGAACGGCTC GGCCGCCCCG TTCGGCTATC AGGTCGTTGC TGCCGAACAG
CGCGGCGCGA AAACCAAGAA GAAGCTCGCC ATTGACCCGG TCGAAGCCGA GACCGTCCGC
CTGATCTTCC GCCTGTTACG CGAAGGCGAC GGCACAATAG GGCCGATGGG CGTGAAAGCC
GTCGTCGTCT GGCTCAATGG CCACGGCTAT CGCACAAGGC GCGGTGCGCG GTGGGGCATC
GGCCCGCTGC ATAAGCTTGT GACCAATCCG GTCTATAAGG GCGAAGCGCA TTTCAATCGC
ACCGATTCCA AGACCCGGAC GGCAAAGCCT GCGACCGAGC ATATCATCGT GCCCGTCGAT
GCGATCATCG ATCCGGCAAT CTTCGACGCG GTGCAGGCGC AGCTCAAAGC GCGCAATCCG
AAGGTCGCGC CGCCGCGCGT TGTGACCGGA CCGATCCTGC TGACCGGCCT TGCCACCTGC
GCGACCTGCG GCGGCGGCAT GACGATCCGC ACCGGAAAAT CGGGCCGCTA TCGCTACTAT
GTCTGCGCGG CGGCGGCTCA GAAGGGCAAG GATGCCTGCC CAGGCCGCTC GCTGCCGATG
GAACGCCTCG ACAATGTTGT AACCGACCGT ATCGGCGAGC AACTGCTGAC GCCGGAGCGC
GTTGCCGAAT TGCTGCGCGG CCTGATGAAC CGTCAGACCA AGCGCGATGA CGATCTTGCA
GGTCGCCTCA CAGCCTTGCG CGCGAAACTC ACCGACGCGG AGGGCCGGCT TAACCGCCTG
TATCAGGCCA TCGAGAACGG CATCGCCGAT CCGAACGATG CGACGCTGAA AGATCGCGTC
GCAGCAATCA AAACCGAACG CGATATTGCC AAGGCCGCCT TCGACCGAGC AGTCTCCGAA
ATGCGCCCGG AAGCCCGGAT CACCGAAGAC AAGATCGCTT CCTTCGTCGC CACCATGCGC
GACAACGTGC TGTCGGGCGA AACCGCCTTT CGCCGCGCCT GGCTGCGCTC GGTCATCGAC
AAGGTGGAGG TGGACGACAC GGAAATCCGT ATTCACGGTC GCAGGACCGT GCTCGAACGG
CTAGTGATGG GGGGAGGGGC GGCACCGGCA GGAGTGCCCA GTTTTGTTCG TGAGTGGCGC
ACCAGACACG ATTCGAACGC GTGA
 
Protein sequence
MKAVAVTASQ PASRAALYLR VSTGRQAESD LSIPDQRRQG IAFCKARGWE VAAEFVDAGL 
SGTDDKRPEL QRLLDLATSD GSPFDVIIVH SFSRFARDHF ALEYHVRRLR KSGVRLVSMT
QDLGDDPMSV MVRQVFALFD EYQSKENAKH VLRAMQENAR QGFWNGSAAP FGYQVVAAEQ
RGAKTKKKLA IDPVEAETVR LIFRLLREGD GTIGPMGVKA VVVWLNGHGY RTRRGARWGI
GPLHKLVTNP VYKGEAHFNR TDSKTRTAKP ATEHIIVPVD AIIDPAIFDA VQAQLKARNP
KVAPPRVVTG PILLTGLATC ATCGGGMTIR TGKSGRYRYY VCAAAAQKGK DACPGRSLPM
ERLDNVVTDR IGEQLLTPER VAELLRGLMN RQTKRDDDLA GRLTALRAKL TDAEGRLNRL
YQAIENGIAD PNDATLKDRV AAIKTERDIA KAAFDRAVSE MRPEARITED KIASFVATMR
DNVLSGETAF RRAWLRSVID KVEVDDTEIR IHGRRTVLER LVMGGGAAPA GVPSFVREWR
TRHDSNA