Gene Nham_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0564 
Symbol 
ID4031312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp624195 
End bp625535 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content68% 
IMG OID637969094 
Producthypothetical protein 
Protein accessionYP_575914 
Protein GI92116185 
COG category[S] Function unknown 
COG ID[COG4223] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGACG ACAGGCACGA TGACGCGTCG CAGGGGGGGA GTTCGCAAAA GCACTCGCTT 
CCCACAGACA TTGAAACGAC TGGAACGTCC GAGGCGGCGG ATCATGCCGG GGCTGCGGGC
GGAGCGGCTG ACGATCGACA GACCGTCGGC GAGCAGTCCG TCCCTTCGCA CGAGCCGTTC
CGCGCCTCCT CGGCCGCGGA TGACAGGCAC GATGACGCGT CGCACCTCGA AGCTAACCGA
ATTTCCGGGA CGGCGGATGA TGCCGGTTCA GGGGATGCGA GCGCAGCGGC TGACGATCGA
CAGGCCGTCG GCGAGCAGCC GGCTCCTCCG CGCGCACCGT CCCGCGCCTT GTCGGCCGTG
ATCGCCGCGG TTACCGGCGC TGTCGCTGCC GGGCTCGTTG TTGGCGGCGC GTGGTTGGCG
GACTGGCCGC CGTCATCCTC CTCCGCGCCT TCTGCTGCGC CGCAAGCGCA AGTCAGTATG
GCGGAATTTG GCGCTCTTTC GAACCGGGTA GCCAGTGTCG AGTCCAAGGC TAGCAGGCCG
GCCGCTCCGG TGCCAGATCC GGCCGTCGCG GCGCGCATCG ACGCCCTGGG AAAATCCGTC
GTATCCTTGC GCGGCGAACT GGCAACGGTT CGCGGTCAAT CCGACAAGCT GGCTGCGGCC
TTGAAGGATG GAGCGGCCGT GCCGCATGAG GCCGACCAGA CGTCTGACCT TGCGGCCATC
AGCGCGCGGC TCGCCCAGGT CGAGCACCAG GTCGAGCAGA CGACGCAAAC CCTGACCGCC
GAGGCAACCA AGCATGACGC GGCTCCGGCC GACGACGTGC CGCTTCGCCG GGCCGTGGCC
GCGACGCTGC TGAACGTGTC GGTGCGTCAC GGGCAGCCTT ATGGCGATCT GCTGGCGGCA
TCGAAGGCCC TGGTTGCCGA TCCCGACACC TTGAAGCCGC TGGAGGTGTT CGCAGACTCA
GGGGTGCCGA GCGCGACCGT GCTGTGCCGC GAACTGCTTG CGATCGTGCC AAAGCTCGCG
CCGGCGCCCG CGCCGGTCAT GGCGACGACC GGCAGCACCA TAGTGGACCG GTTGCAGGAA
GGCGCCGCAC GTCTGGTGCG TATCGAACGC ATCGATGCTT CGCCCGCAGA TTCCACCGGC
GCCGTGGTTG CGCGCATCAC GGCATCGGCG CGGCAAAATG ACGTTGCTGC CGCGAGGGCG
GAATTGAACG CACTTCCTCC GGCCGACCGC ACGACCGCCG AGCCCTGGAT CGCCAAGGCC
GACGCATACG ATGCCGCTCT TGCCGCGTCG CGTCAGTTCG CAGCCGACGC GATGGCGGCG
CTGACCAAAC CAGCGCCATA G
 
Protein sequence
MADDRHDDAS QGGSSQKHSL PTDIETTGTS EAADHAGAAG GAADDRQTVG EQSVPSHEPF 
RASSAADDRH DDASHLEANR ISGTADDAGS GDASAAADDR QAVGEQPAPP RAPSRALSAV
IAAVTGAVAA GLVVGGAWLA DWPPSSSSAP SAAPQAQVSM AEFGALSNRV ASVESKASRP
AAPVPDPAVA ARIDALGKSV VSLRGELATV RGQSDKLAAA LKDGAAVPHE ADQTSDLAAI
SARLAQVEHQ VEQTTQTLTA EATKHDAAPA DDVPLRRAVA ATLLNVSVRH GQPYGDLLAA
SKALVADPDT LKPLEVFADS GVPSATVLCR ELLAIVPKLA PAPAPVMATT GSTIVDRLQE
GAARLVRIER IDASPADSTG AVVARITASA RQNDVAAARA ELNALPPADR TTAEPWIAKA
DAYDAALAAS RQFAADAMAA LTKPAP