| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0514 |
|---|
| Symbol | rplU |
|---|
| ID | 4029963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 570136 |
|---|
| End bp | 570522 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637969044 |
|---|
| Product | 50S ribosomal protein L21 |
|---|
| Protein accession | YP_575864 |
|---|
| Protein GI | 92116135 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0261] Ribosomal protein L21 |
|---|
| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCAG TCATCAAAAC CGGCGGCCGG CAATACCGCG TCGTTCCGGA TGATGTGCTT
GAGATTGGCA AGATCGCCGG CGATGTCGGA ACGATCGTGC AGCTTGGTGA AGTTCTGGTG
CTCGGCGGCG ATACGCCGGT GCTCGGCCTA CCCACGGTGG CCGGCGCCTC GGTCGCGGCG
GAGGTGCTGC AGCACAAGCG CGGCCCCAAG GTGATCGCGT TCAAGAAACG CCGCCGCAAG
CATTCCAAGC GCAAGCGTGG TTATCGCGAC GAGATCACGG TGCTGCGCAT CACCGAAATT
CTCGCTGACG GCAAGACCCC GACCGTCGGT CCACGCCCCA AGAAGGAAAA GGTCGTCGAG
CCCGCCGAAG GCGAGGGTGA CCACTAG
|
|---|
| Protein sequence | MFAVIKTGGR QYRVVPDDVL EIGKIAGDVG TIVQLGEVLV LGGDTPVLGL PTVAGASVAA
EVLQHKRGPK VIAFKKRRRK HSKRKRGYRD EITVLRITEI LADGKTPTVG PRPKKEKVVE
PAEGEGDH
|
|---|
| |