Gene Nham_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0513 
Symbol 
ID4029962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp568605 
End bp569741 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content63% 
IMG OID637969043 
Producthypothetical protein 
Protein accessionYP_575863 
Protein GI92116134 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.543532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGAAG ATACCCTGAC GACGTCGGGC ATCGGCAAGC ACGGCGTTCC GCGGCTGCCG 
TCGGTGGATG TCGACAGCTA CAACATCGAA CTGAAGGACG ACGACGGTTT CCTTGGCGAC
CGCGCCAGCA AGGGCGCATT CCGGAAAATC CTCGACGGCC TGCGCAAGCC GCTGAAGAAA
AACGGCGACG ATCCGCTCGG CGACACTCCG TCGGAGGAGA TCGCCAAGGG CTCGCTCGAC
GAGGCGCTGG TCGGCGACGA CATCGAGGCC GCCGCCCTGG TGCATGGCGC CATCGAGGAG
TTCGCGCAGG AACTGGCCTA TGTGACGGGA CGCTTCCTCA AGACCAAGGC ATGGGCCGAC
ACCGAATGCA TCGTGGTCGG CGGCGGCTTT CGCAAGAGCC GGGTCGGCGA AATCGCGATC
GCGCGCGCCG ACCTGTTGCT GAAAAGCGAG GGCCACAAGG TCCATCTGAT CCCGATCCGC
TTCGATCCCG ACGAGGCCGG ACTGATCGGC TGCCTGCATC TGGCGCCGTC GTGGATCTTC
GAGGCGTTCG ACAGCATCCT GGCGGTCGAT ATCGGCGGCA CCAACATCCG CTGCGGCGTG
GTCGAGACCC GCTGGAAAAA GGCCGCCGAC CTCTCCAAGG CCGGGGTGTG GAAGTCCGAG
CTATGGCGCC ACGCCAACGA CGAGCCGACC CGCGAGAGCG CGGTGAAGAA GCTCGTGAAG
ATGCTGAAGG ACCTCATTTC GCAGGCGGAA AAGCAGGGGC TGAAGCTCGC GCCGTTTATC
GGCATTTCCT GTCCGGGCGT GATCGAGCAG GACGGATCGA TCGAGAAAGG CGCGCAGAAT
CTTCCGGGCA ACTGGGAAAG CAGCAAGTTC AACCTGCCGG GGTCGCTGGT CGAGGCCATT
CCGGAGATCG GCGGTCACGA CACCACCGTG CTGATGCACA ATGACGGCGT GGCGCAAGGC
CTGAGCGAAA TGCCCTACAT GCAGGACGTC AGCCGCTGGG GCGTATTGAC CATCGGCACC
GGCCTAGGCA ACGCGCGGTT CACCAACCGC AAGAAAGATA ACAAGAAAGA CAAGAAGCCC
GACGACGACG GCAAGGACAA GAACAAAGAC AAGAAGGACA GGAAAACCAG GGACTGA
 
Protein sequence
MAEDTLTTSG IGKHGVPRLP SVDVDSYNIE LKDDDGFLGD RASKGAFRKI LDGLRKPLKK 
NGDDPLGDTP SEEIAKGSLD EALVGDDIEA AALVHGAIEE FAQELAYVTG RFLKTKAWAD
TECIVVGGGF RKSRVGEIAI ARADLLLKSE GHKVHLIPIR FDPDEAGLIG CLHLAPSWIF
EAFDSILAVD IGGTNIRCGV VETRWKKAAD LSKAGVWKSE LWRHANDEPT RESAVKKLVK
MLKDLISQAE KQGLKLAPFI GISCPGVIEQ DGSIEKGAQN LPGNWESSKF NLPGSLVEAI
PEIGGHDTTV LMHNDGVAQG LSEMPYMQDV SRWGVLTIGT GLGNARFTNR KKDNKKDKKP
DDDGKDKNKD KKDRKTRD