| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0488 |
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| Symbol | |
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| ID | 4029860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 540250 |
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| End bp | 541209 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637969016 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_575838 |
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| Protein GI | 92116109 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCG ACAAAACCTC CGACGCCAAA CTGACGAATC TGTTCCTCGA CATGCTGGCG
GCCGAGCAGG GCGCCGGCGA CAACACGCTC GACGCCTACC GCCGCGACCT TGAGGATCTT
TCGGCGTTCC TCACGCGCGT GGGGCAGACC TTCGTCACCG CCGGCACCCA GACGCTGCGG
GACTATCTCG GCGATCTCGA CGTCAGGGGC TTCAAGTCAT CGAGCGTCGC ACGCCGTCTG
TCGGCGATGC GCCATCTGTT TCGCTTTCTG CTGAGCGAAC GCATCAGAAG CGACGATCCC
GCGGCCATCC TGTCGGGTCC GAAGCGCGGA CGGAGCCTGC CGAAAGTGCT GTCGATAGCG
GATGTCGACC GCCTGCTCGC ATGCGCGAAA GCCGCGATGG AAACGCCGGA CGCCTCACCC
GCCCGGCGAT TGCGCGCCGC GCGACTGTAT TGCCTGCTCG AAGTGCTCTA CGCCACCGGC
CTGCGCGTGT CTGAGCTGGT CTCGCTGCCG CTATCGGCCG CGCGGCGCGA TGCCCGCATG
ATCGTGGTGC GCGGCAAGGG TAACAAGGAA CGGCTGGTGC CGCTGAACGA GGCGTCGCGG
CAGGCGATGG CCGATTATCT CGCCGCGATG GCCGATCGGC GCGGTGCGGA CAAGGCCGTA
GCAGTGCAGC CGAAGTGGCT GTTTCCGTCG TTCGGCGAAA GCGGCCACCT GACGCGCCAG
CATTTTGCGC GCGAGCTGAA GGAACTCGCG GCGGCGGCCG GTCTCGCGCC CCGTCTGGTC
TCGCCGCACG TGCTGCGTCA TGCCTTCGCA AGCCACCTGC TGCATAACGG CGCGGACCTG
CGAATCGTGC AGACCCTGCT CGGCCACACC GACATCTCGA CCACGCAAAT CTACACGCAC
GTCGTGGAAG AGCGGCTGAA AAGCCTGGTG CGCGATTTGC ACCCGCTGGC GGAGGCCTGA
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| Protein sequence | MKTDKTSDAK LTNLFLDMLA AEQGAGDNTL DAYRRDLEDL SAFLTRVGQT FVTAGTQTLR
DYLGDLDVRG FKSSSVARRL SAMRHLFRFL LSERIRSDDP AAILSGPKRG RSLPKVLSIA
DVDRLLACAK AAMETPDASP ARRLRAARLY CLLEVLYATG LRVSELVSLP LSAARRDARM
IVVRGKGNKE RLVPLNEASR QAMADYLAAM ADRRGADKAV AVQPKWLFPS FGESGHLTRQ
HFARELKELA AAAGLAPRLV SPHVLRHAFA SHLLHNGADL RIVQTLLGHT DISTTQIYTH
VVEERLKSLV RDLHPLAEA
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