| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0425 |
|---|
| Symbol | |
|---|
| ID | 4030119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 469440 |
|---|
| End bp | 470465 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637968954 |
|---|
| Product | perplasmic binding protein of ABC transporter |
|---|
| Protein accession | YP_575776 |
|---|
| Protein GI | 92116047 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGCC TTGCCCTTTC GCTGCGAACG TTGACGGCCG GACTGGTGCT GGCGCTCGGC
CTTGCCGGAC CGGCCACGGC CGAGCCGGCG CTGGACAAGG TCTCCTTTGG CACGAATTGG
GTCGCCGAGG GCGAGCATGG CGGCTTCTTT CAGGCGCTGG CCGACGGCAC TTACAAAAAA
TATGGTCTGG ACGTGAAGAT CGTGCCGGGT GGCCCCAACG TGAACAACCG GGTGCTCCTG
ATCTCCGGCA AGCTCGATTT CTTCATGACC GCGAATACCT TGCAGTCGTT CGACGCGGTG
GCCAACAACG TGCCGGTCGT CGCGGTCGCC GCGATGTTCC AGAAGGACCC ACAGGTTTTT
CTCGCGCACC CGGAATCGAA GGTGACAAAA ATCGAGGACC TGAAGCCACT CACGCTGTTC
GTGTCAAAGG AAGGGATCGC GAGCTATTTC CAGTGGCTCA AATCCGAGTA TGGATTCAGC
GGGGAGAAGG TCAAACCCTA CACCTTCAAC GCCCAGCCGT TTCTCGCCGA CAGGAAAAGC
GCGATGCAGG GCTATGTCAC CTCGGAGCCG TTCGCGGTGG AGAAGCGGGC GGGCTTCAAG
CCGACCGTGA TCCTGCTCGC TGATGCCGGA TTCAACCCGT ATTCGACCCT GATCGAAACC
CGCCGCGATC TGGTCGAGAA CAAGCAGGAT CTGGTGCAGC GCTTCGTCGA CGCCTCGATC
GTCGGTTGGT ATACCTACCT GTACGGCGAC AACACCGCCG GTAATGCCAT GATCAAGAAG
CTCAATCCCG AAATGACCGA CGACCTCCTG GCCTATTCGG TGGCGAAGAT GCGGAAGTAT
GGCATCGTCG ATTCCGGCGA TTCCTTGCGT GACGGCATCG GCGCCATGAG CGATGCGCGC
TATGCGAGCT TCTTCGACAA GATGGTGCGG GCGGGGGTGG TGCGCCGGGA CATCGATTTT
CGCAAGGCCT ACACGCTACG GTTCGTCAAC AAGGGCGTCG GCCTCGACTT GCGGCCCAAG
AATTAG
|
|---|
| Protein sequence | MMRLALSLRT LTAGLVLALG LAGPATAEPA LDKVSFGTNW VAEGEHGGFF QALADGTYKK
YGLDVKIVPG GPNVNNRVLL ISGKLDFFMT ANTLQSFDAV ANNVPVVAVA AMFQKDPQVF
LAHPESKVTK IEDLKPLTLF VSKEGIASYF QWLKSEYGFS GEKVKPYTFN AQPFLADRKS
AMQGYVTSEP FAVEKRAGFK PTVILLADAG FNPYSTLIET RRDLVENKQD LVQRFVDASI
VGWYTYLYGD NTAGNAMIKK LNPEMTDDLL AYSVAKMRKY GIVDSGDSLR DGIGAMSDAR
YASFFDKMVR AGVVRRDIDF RKAYTLRFVN KGVGLDLRPK N
|
|---|
| |