| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0395 |
|---|
| Symbol | |
|---|
| ID | 4030204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 437096 |
|---|
| End bp | 437581 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637968924 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_575746 |
|---|
| Protein GI | 92116017 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0610661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTTCA AGTTTTTGCG TGGTCGTTCG CGTGCTTCGG TCGTCGGCCT GTCGCTTGCA
ACGGCGATTT TGCTTGGTCC GACGGCGGCT CTCGCCGAGG TGACGAGCGA CCCGATCTCG
GTCAATGTGG ACCAGGCGAA GCTGGTCAAG CTGCCCGGAC ATATCGCGAC GATCGTGGTC
GGTAACCCGC TGATCGCCGA CGTCACCCTG CAGCCGGGCG GCCTCGTGGT CGTGACCGGA
AAGGGATACG GCGCAACCAA CGTGATTGCG ATGGACCGCG CCGGGAGCAT TCTGGTGGAT
CGCGTCATTC AGGTCGAAGG GCCGAGCGAT CAGGTGGTGA CGGTCTATCG CGGCGTGGAG
CGCGAGTCGT ATAGCTGCAT GCCGGTTTGC CAGAAGCGCA TCACCCTCGG GGACAGCGTC
GCCTACTTCA AGGCGACGAT GGACCAGGCC AGCAATCTAA GTTCGCAGGC CGGCGGTGCA
AAATAA
|
|---|
| Protein sequence | MWFKFLRGRS RASVVGLSLA TAILLGPTAA LAEVTSDPIS VNVDQAKLVK LPGHIATIVV
GNPLIADVTL QPGGLVVVTG KGYGATNVIA MDRAGSILVD RVIQVEGPSD QVVTVYRGVE
RESYSCMPVC QKRITLGDSV AYFKATMDQA SNLSSQAGGA K
|
|---|
| |