| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0349 |
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| Symbol | |
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| ID | 4030446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 381121 |
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| End bp | 383289 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637968883 |
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| Product | periplasmic sensor hybrid histidine kinase |
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| Protein accession | YP_575705 |
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| Protein GI | 92115976 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0784] FOG: CheY-like receiver
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.081308 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAACACG GGCAGTCCCA CCGCGCCGTG CAGAGCGAGC GTCACGCCGC CGTCAGGCTG
CTCAAGGCTT TGATGGTGGC ATCGGTATTG CTGCCGATGG CGTTGTTTGC AATCACCGCC
TGGGTGGATT ACCGCAATTT CGAACGCATC ACCAACGAGC GCATCGATCG CTCGCTCGAC
ATCCTGCATG AGCATTCGCT CAAGGTCCTG GAAACGACCG AGCGTGCTTA CGCGGAAGTC
AACGAGGTCG TGCGGGGCAT GTCGGATAAC GACATCCGCC TGAACGAAGC TGCCCTGAAC
AAACGGCTCA AGCAGATCGT CACGGGCACG CCGCAGATGC AAGGCATCGA GATCATCGAC
CGCGACGGCC ATCCGCTGGT CTCCTCCAAC GGTCTGCTCA CGCCGGGAGA TATCGACTTC
AGCAAGGCTG AATATTTTAC CGCGTTGAAA AGCAGAGAGG GCGGTACATA TGTGAGCACC
ATCAACGCGC CCCGCCCGGG CGTGCCAGGC TATTTCATTT CACTGTCGCA GCGCCGGCCT
TGGGACGACG GCACGTTCAA CGGCGTCATC TCGATTGCAG TCCCGACGAG CTATTTCGAG
AATTTCTACG CCCATATCAG CGACACAGTC GACTATTTTG CCTTGGTGCG CGCCGACGGC
CATTTTCTGG CGCGCTATCC AGTTGTCTCG CCGGCCAGTC TTCTCAGCTT CGACGACGAT
AAGGATTTCC GCACCCGCAT TGCGCACGGG CACGATTACT CCATTTATAC GGCGGAGTCG
CCGTACGACC ACATCACCCG CCGCATCGGC TATCGCAAGA TCGCGGGCTA TCCTCTCTAC
GTGCTGGTCG GCGTGGAATG GAAGGCGATT GTCTCCGAAT GGCTGCGTTA CAACATCAAC
TACCTGATTT TCGGCGCCCC GCTGATGGTG TTTCTGTTCG CGGTCCTTGG ATTGGCGCTG
CGGCGCACGC AACGTCTTTA CGACGAATCC GAGCGGCGCG AGGCGGTCGA GAACGCCTTG
CGTCATGCGC AACGAATGGA GGCGATCGGG CAGTTGACCG GCGGCGTGGC GCACGACTTC
AACAACCTGC TGATGATCAT CAGCGGTAGC GTGCAGCGCC TGCGCCGCGA ACTCACCGAC
AAGAAGTCGC TGCGGCTGCT CGATATGATC GGCACCGCCA CTCACCGCGG CGAGACGCTC
ACCCGCCATT TGCTCACTTA TTCGCGGCGC CAGACGCTGA CGCCGGAGGT GATCGATCTC
GCGCAGCGGC TGCCGGTGCT GCGTGAATTG CTCACGCGTT CACTTCGTAC CGATATCGAG
ATTAATGTCG AGGTGCCGGA TACGGTCTGC GCCGTACGCG TCGATCCCAG CGAATTCGAG
CTTGCCATCC TCAACCTCGC CGTCAACGCC AAGGACGCCA TGCCGAACGG CGGCGCGCTG
TCGATGAGCG CAAGACCGGT GACGCTCAAG GGCGATGCCA GCGAAGAAGG TCTTTCCGGC
GATTTCGTTG CAGTGTACGT CGCAGACACC GGACAGGGTA TTCCCGCCGA TGTCATGATG
CGCGTGTTCG AGCCGTTCTT TACCACCAAG GATGTCAGCA AGGGCACCGG GCTTGGTTTG
AGCCAAGTCT ATGGCTTTGC CAAACAGTCT GGCGGCACCG CAACGGTGAC GAGCACCGAA
GGGCAGGGTA CCACGGTGAC GCTCTATCTG CCGCGTAGCC TGGAACAGCC GCAACCCGCC
GAGCCGCCCC TACAGGCACC GGCGCAGGCC GAAGCCGCCG GCACCGTGCT GCTGGTCGAG
GACGATGTCG ATGTAGCCGA TGTCGGTGCC AGTTACATGC GCCAACTCGG TTATCGCGTG
CGCAGTGTTG CCGATGTGCA GGCTGCGCTC GCCGCCCTGC AGGTTGATGC GCAAGTGGAC
CTCGTATTCT CCGACATCAT GATGCCGGGC GGCCGCAATG GGCTCGATCT CGCGCGCGAG
ATCGGCGAGC GCTTTCCGCA CATCCCGGTG TTGCTCACCA CCGGCTACAG CGCCAGCGCC
CAGGATGCCG CGCGATACGG CGTGGTTGTT CTGCAAAAGC CCTATGACCT TGAGAGCCTG
CGCCGCCACG TTCGCGAGGC GATGGAGCAG GCCAGGGTCC CGCCGGCCGC GCTTGGTGTA
GCGGGTTAG
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| Protein sequence | MEHGQSHRAV QSERHAAVRL LKALMVASVL LPMALFAITA WVDYRNFERI TNERIDRSLD
ILHEHSLKVL ETTERAYAEV NEVVRGMSDN DIRLNEAALN KRLKQIVTGT PQMQGIEIID
RDGHPLVSSN GLLTPGDIDF SKAEYFTALK SREGGTYVST INAPRPGVPG YFISLSQRRP
WDDGTFNGVI SIAVPTSYFE NFYAHISDTV DYFALVRADG HFLARYPVVS PASLLSFDDD
KDFRTRIAHG HDYSIYTAES PYDHITRRIG YRKIAGYPLY VLVGVEWKAI VSEWLRYNIN
YLIFGAPLMV FLFAVLGLAL RRTQRLYDES ERREAVENAL RHAQRMEAIG QLTGGVAHDF
NNLLMIISGS VQRLRRELTD KKSLRLLDMI GTATHRGETL TRHLLTYSRR QTLTPEVIDL
AQRLPVLREL LTRSLRTDIE INVEVPDTVC AVRVDPSEFE LAILNLAVNA KDAMPNGGAL
SMSARPVTLK GDASEEGLSG DFVAVYVADT GQGIPADVMM RVFEPFFTTK DVSKGTGLGL
SQVYGFAKQS GGTATVTSTE GQGTTVTLYL PRSLEQPQPA EPPLQAPAQA EAAGTVLLVE
DDVDVADVGA SYMRQLGYRV RSVADVQAAL AALQVDAQVD LVFSDIMMPG GRNGLDLARE
IGERFPHIPV LLTTGYSASA QDAARYGVVV LQKPYDLESL RRHVREAMEQ ARVPPAALGV
AG
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