Gene Nham_0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0347 
Symbol 
ID4030444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp378592 
End bp379356 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content58% 
IMG OID637968881 
Productband 7 protein 
Protein accessionYP_575703 
Protein GI92115974 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.315344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCTCG ATTACGTAAC CTATATAGTG CTCGCGGTCG TCGTGATCGC ATTTCTCTCC 
TCGTCCATTC GTATCCTGCG GGAATACGAG CGCGGCATCA TCTTCACGCT CGGACGCTTC
ACCGGCGTGA AAGGTCCCGG CCTCATCATC CTGATTCCGT TCGTGCAGCA GATGGTGAAG
GCCGATCTCA GGGTCATGGT ACAGGACGTG CCGCCGCAGG ACGTGATTTC CCGCGATAAC
GTTTCCGTCA AGGTGAACGC CGTGCTTTAT TTCCGCATCA TCGATCCCGA ACGCGCGATC
ATTAAGGTTG AAAACTTCAT GGCCGCGACC AGCCAGTTGG CGCAAACCAC GCTGCGCTCG
GTGCTCGGCA AACACGAACT GGACGAGATG CTCGCGGAGC GCGACAAACT CAACGCCGCC
ATTCAGGAGA TTCTCGATCA GCAAACCGAT GCGTGGGGAA TCAAGGTCAC CAATATCGAG
ATCAAGGACA TCGACCTTAA CGAAAACATG GTTCGTGCCA TCGCCAAGCA AGCCGAGGCG
GAGCGGCTAC GGCGGGCGAA AGTGATCAAT GCGATGGGCG AGCAGCAAGC CGCCGAGAAG
CTCGTCGAAG CCGGACGGAT CCTTGCTCAG GAACCGCAGG CCATGCAGCT GCGCTATTTT
GCGGCGTTGC ACGATATTGC CGGCGAGCGA TCATCGACTG TGGTGTTTCC GCTGCCGATG
GATCTGCTCA GCCATCTAAA GCCCCGACCC GACGGAACGT CATGA
 
Protein sequence
MMLDYVTYIV LAVVVIAFLS SSIRILREYE RGIIFTLGRF TGVKGPGLII LIPFVQQMVK 
ADLRVMVQDV PPQDVISRDN VSVKVNAVLY FRIIDPERAI IKVENFMAAT SQLAQTTLRS
VLGKHELDEM LAERDKLNAA IQEILDQQTD AWGIKVTNIE IKDIDLNENM VRAIAKQAEA
ERLRRAKVIN AMGEQQAAEK LVEAGRILAQ EPQAMQLRYF AALHDIAGER SSTVVFPLPM
DLLSHLKPRP DGTS