Gene Nham_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0330 
Symbol 
ID4030486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp360182 
End bp361186 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content52% 
IMG OID637968864 
Productexonuclease 
Protein accessionYP_575686 
Protein GI92115957 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAATT CAGATTTTAT TGTGTTGGAC GTGGAAACGG CCAATGCCGA CTATGCCTCG 
ATATGCCAGA TAGGCTTGGT TGAGGTGGTG GCCGGCGAGG TGGTTTCTCA GGAAGCGATA
CTGGTGAACC CGGACGACTA TTTCGATGGG TTCAATACCT CTATTCATGG AATCACCGCA
GACCACGTTT GTGGCGCGCC TCTATTCCAC GAAGTCCACG CCGCACTGTC TCAACGCCTT
AGCGGCTCAA TTATTGTGCA CCACGGGCCG TTTGATCGGG TGTCTATATC GCGGGCATGC
GAGCGCTGCG GGATTGAAAG CTTCGACGTG CAGTGGCTCG ATAATCAGCG AGTAGTGCGC
AGAGTGTGGG AGCAATTCAG CAAGAGCGGG TATGCCCTAA AAAGCCTGGC CGCGTTTTTC
GGAATTGAAT TCCAACACCA TGATGCTTTG CAAGATGCCA TCGCCACAAA TGAGATATTC
CGGCGAGCCC TAAATGAATC CGGAACGACT GCTGCTGATT GGCTATCCCG AATAAAGCAA
TCGCTGCCGA CTACTGCGAA GACGATATCT GGCGATGGAA ATCCTGATGG TCCGTTTTCT
GGCGAAACCA TCGTTTTCAC AGGTGAACTG AATATCCCAC GTTCAGAGGC GGCCGATATA
GCTAAGAGGT TAGGATTCCG AGTCGAGGAT GGCGTCACTA AACGCACGAC TGTTTTATGT
GCCGGGGTTC AGGATAGGAC CAAAACCGGC GGATACGACA AATCTTCCAA ACACCGCAAG
GCCGAGTCTC TGGCGGGCTT AGGGCAGGAC ATTCGTATTC TGTCAGAGGG CGATTTTTGG
GCAATCGTAC CGAAACCGAT GCGACCGAAC GTTAAAACCG AACGGCCACC ATCTGAGCGT
TCCAATCATC GCGGTCAGTT AATCGTTTCG CTATCACTGG AAGACCTATT CACAGATGAG
GAATTGCAAA GAATGTTGAC CGGGATGCCT TTGAGTGACG CCTAA
 
Protein sequence
MSNSDFIVLD VETANADYAS ICQIGLVEVV AGEVVSQEAI LVNPDDYFDG FNTSIHGITA 
DHVCGAPLFH EVHAALSQRL SGSIIVHHGP FDRVSISRAC ERCGIESFDV QWLDNQRVVR
RVWEQFSKSG YALKSLAAFF GIEFQHHDAL QDAIATNEIF RRALNESGTT AADWLSRIKQ
SLPTTAKTIS GDGNPDGPFS GETIVFTGEL NIPRSEAADI AKRLGFRVED GVTKRTTVLC
AGVQDRTKTG GYDKSSKHRK AESLAGLGQD IRILSEGDFW AIVPKPMRPN VKTERPPSER
SNHRGQLIVS LSLEDLFTDE ELQRMLTGMP LSDA