Gene Nham_0297 details

Gene Information

• Locus tag: Nham_0297
• ID: 4030568
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 329222
• End bp: 332593
• Gene Length: 3372 bp
• Protein Length: 1123 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637968831
• Product: hypothetical protein
• Protein accession: YP_575653
• Protein GI: 92115924

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATAGGA TACTGATTGC CGCACTTCTC TCGATGCTGC CCATCTCCAG CTATGCGGCG 
AAAGGCTACT TCACCGAGCT CCCATCGGGA CAATGGCTCG TGTTTACGCC AGAGCAGGTT 
GGCCGATACG CTAAAGCCGA CCGTGAGTAT TGTGCGGTCG CCCTCAAGCG TGGGATCGAA 
CAGAACGCGA GATTGAACAA TGAACCGCAA GATTGCTTGG AAGGAGTGGC ATTCGGCCCG 
GCGGTGGGCG AAGGGCCCGT CCTCACGTTA GGCGCAGGCT TCGACAGCCG CATTCCTGGC 
TTACGGACCC GCTTGAGCGT TCCGAGCTGG GTAGGGCAAC ATGATGCACT CGTCTTGGAT 
GAATACGTCT CAAGCGCATT GGAGCTATAC CAGTGGGCGC ATGGGCTGCC CGAAACTGGC 
ACGCTCGATG CCGTTACTGT GGGGACCTTG GACCGCAACG TGCGCACCAC GAGCGTTCCC 
AACGACCAGC AGGCACTCAC GAATATAGAA CCGCAACCTG CTCCCGAATC AGAACTAGCT 
GAGACCCAGA CCGAAACTCG CACCCCGCTG CTGGAGAAAT CTACCGCCGC ACCATTGCCT 
ATGCAGGCGG GGCCCATGAT AGCACCGCAA GTGCCGCCCT CCACGGCCAT GATCGACCTG 
CGCTCCTTGA GCCAATTTCT CTTCGCTTTG ACGATCCTAT TTCTGGTCTT CCGGGGACGG 
CTGGCCATCG ATTGGGCCTT AAACGTCGGC GGGCCCCGCG TCGCGTCTGC GGCACGCTCG 
CCGCGCGTGA AGTCATTCCT CCTCCGTGCA TGGGATGCGC TCAACCGCAT TTACGCTTTC 
CTCAAAGGAA GCCCGGTTGT TCCTAAAGCT GTCGGAGTCG CGGGAGGACT CATAGCCTAT 
TTTTTTAATG AGCCACGCCG CTTAGCGGCG TGGGGATTAG TCATATGGTT CGCGTTGTCC 
GTTCTGCTCA GCTTGAGCAT CGGCAATGCG CCCGGGCTTT TCGGCTGGTT CATCGTCGGG 
CTCTTCTTCC TTGCGCAGGC CGACTACCAC TTCCTCATCC TGCGCGGGGA GAACCGCGTC 
CTCGCCTACA AGAAGGCGGC GAGAATAATC GTGTTCGTGA TATTCCCGCT CTTCTTCACG 
TCGCTCGTGC TGGTCGGTTT CTTGGCGCTC GGCAGCCCTA AGCAGCAGGG CGCCGGCGTG 
CTCGCCATCC TCATCGGCCT TCCGACAGCG ATACTGTATT TCTGCTTCCT TCGAGCGTAC 
CGCGACGCGG AATGGGCAAG CCTTTGCAAA TACGAGAAGA TGTACGCAAG CGCGGGCGAC 
GGCTTCACCT CAATCGACCT CGCGCAGCGC ATACTGTCCC AGCTTCCCTC TACAAGCCTC 
CGCGTCGAGC CGGTCATCGA GGCCCTGAAG GAGGAACTGC TGGGCGGCAT GCCCGAGCCG 
CCCGAGTCGC GGTTCGATCT GCATGATCAT GCCGCGTACC GCGCAATGCT GGAGCAGCTC 
TCCTTCGCCA CCCCGGAAGC CGAGGACTTG TTCGTCGAGA TGGTCGTCGC CGCGCTCATG 
ACGATCGTCC CGAAATTTCC GAAGCCCGCC GGCGCCCCGA TGTTCACGAC GCGAATGGAG 
GACCCGCTCA GCGCCGTCTG TGACTTCATG CAGTGCCTCA TCCATCCGCG CGCCGTGCAG 
CTGAGGGTCC TGGAGAGGCT GCGGACCGCG TTCAACAGGA ACGTCGGCGA ATTGCAGGCG 
CGCAAGGCGG GCCTCACGAT AGACGCGGCT CTAGAGCTGG CGCTGAAGGA TACGCCGCTT 
CTGGACCTGT TCAGGTCCCA CCTTCCCTAT GAGCTGGAGA TATCGGACGA GTTCTTATAC 
GGCGGCATCC ATATCTGCGC GCCTCCGGGC GGCATGAAGA CGCAGCTGAC GCAGACGCTG 
GTCCTGCATC TAGCGCATTA CTTCAATGAC CCGGCCTTGA TCGTGGTCGA CTCACAGGGT 
CCCATCCTCG ACCTGCTTGA GCGCAAGTTC GCGCCTCAGC TTGGAGCAAG CTTTTTACGA 
ATTCATCCGC ATAAAGCCCC CATCAACATC AATCCTTTCG ATGTTGATTT CTCGGGCATG 
ACTGAGGCTG AGCAGGGCAG CGCTATTACC TCGGTAGCTG ATTTCTTCGT AGCCTTGTTC 
GCGACGGGGT CGAGCGAGCT GAGCGGCAAG ATGAAGACGC TGTTCGATCA GGTGGTGCGC 
CTCTTTCTCG TTGGCATTCC CGCGGTACAA AAACGCACGG CAACGATGCG CGACCTTCAC 
GACTTTATGG CTTCTTCCCA GCCATGGGCA AAGTACAAGG CGGAAATCGA GTATCTTGAC 
GATGATGGGA GGATGTTCTT CGACAAGCAT AATATCAGCG GCTACTCAGA TACTCGTTTG 
CAGGTGCATC AGCGGCTCTA TGAAGTGCTG CGTGACCCCG CGATAAGGAA AATGCTCTGC 
GCAGAGCGCA ACGAGCTTGA CCTCGACCGC TACCTCGACG GACCGGGCAT GGTGCTGGTC 
GATACGAGCG GCAACTTGGG CTTCGAGAAC GCCGCGTTTT TCGGACGGCT ATTCATATTG 
CTCGCGCAGC AGTCGATGAT GCGGCGGATT CCCGCGCCAA CCGGCGATCC CTATCCGGCG 
TTTCTGCTTT GCGACGAAGC GCACGAGTAC TTTAAGGCGG AGGGCGTCCT GCGCCAGTTC 
ATCTACCAGG GACGCAAGCG GCGCTTCGGC ATCGTCCTCA CGCATCACCA GTACAGCCAG 
GCCCCGGGCG CCTTGCAGGA TGCGCTGGAG CATATGGCCG TGCATTTCAC GACGCGCGTC 
GCGCCGAACG ACATGGCCCG GCTATCCGGG ATATTCCACG CTCCACCTTC GTTCCTGCAA 
GCGCAGCGGC CTGAACCCGT GAAGGCGCCC AAGCTTCCGA AGTGGATCGA CTATGCTCTG 
TATTATCCTA GCCTTGAGCA TGCGATCAGC GTGCGGCTGG CATACGGCAA CCTCGAGAAT 
TTCGACACGT CGAATATGTA CCGAGGCGCT CGCAATCGAA GCCAACAGGG CAACTCAGGT 
CAACAGAATA GCAAGCAAAG CCAGAGCCCG CCGCCGCCGC GCCCCGATCC CGTCGGCTCG 
AAGGACGTCG AATGGAATCA TACGATAAGC CCGATTAAGG CGAAGAACGG ATGCACTATC 
GCGGACTTCA AGATGCCGGA CGGCACTCTT GCGGATATCG TTATACGGCC CGGCACTGTC 
GACGGCACCA AGCTCAGATT CAAGGGACGC AGCGGACAGG GCGGCGACTT CTTCCTGAAG 
ATCATCGTTC CGCCGATGCC CGAGCAGTCC GATCGCGAGG ACATGGATAT GGGAGCTGCT 
CCGTGGCCAT GA 

 

Protein sequence

MYRILIAALL SMLPISSYAA KGYFTELPSG QWLVFTPEQV GRYAKADREY CAVALKRGIE 
QNARLNNEPQ DCLEGVAFGP AVGEGPVLTL GAGFDSRIPG LRTRLSVPSW VGQHDALVLD 
EYVSSALELY QWAHGLPETG TLDAVTVGTL DRNVRTTSVP NDQQALTNIE PQPAPESELA 
ETQTETRTPL LEKSTAAPLP MQAGPMIAPQ VPPSTAMIDL RSLSQFLFAL TILFLVFRGR 
LAIDWALNVG GPRVASAARS PRVKSFLLRA WDALNRIYAF LKGSPVVPKA VGVAGGLIAY 
FFNEPRRLAA WGLVIWFALS VLLSLSIGNA PGLFGWFIVG LFFLAQADYH FLILRGENRV 
LAYKKAARII VFVIFPLFFT SLVLVGFLAL GSPKQQGAGV LAILIGLPTA ILYFCFLRAY 
RDAEWASLCK YEKMYASAGD GFTSIDLAQR ILSQLPSTSL RVEPVIEALK EELLGGMPEP 
PESRFDLHDH AAYRAMLEQL SFATPEAEDL FVEMVVAALM TIVPKFPKPA GAPMFTTRME 
DPLSAVCDFM QCLIHPRAVQ LRVLERLRTA FNRNVGELQA RKAGLTIDAA LELALKDTPL 
LDLFRSHLPY ELEISDEFLY GGIHICAPPG GMKTQLTQTL VLHLAHYFND PALIVVDSQG 
PILDLLERKF APQLGASFLR IHPHKAPINI NPFDVDFSGM TEAEQGSAIT SVADFFVALF 
ATGSSELSGK MKTLFDQVVR LFLVGIPAVQ KRTATMRDLH DFMASSQPWA KYKAEIEYLD 
DDGRMFFDKH NISGYSDTRL QVHQRLYEVL RDPAIRKMLC AERNELDLDR YLDGPGMVLV 
DTSGNLGFEN AAFFGRLFIL LAQQSMMRRI PAPTGDPYPA FLLCDEAHEY FKAEGVLRQF 
IYQGRKRRFG IVLTHHQYSQ APGALQDALE HMAVHFTTRV APNDMARLSG IFHAPPSFLQ 
AQRPEPVKAP KLPKWIDYAL YYPSLEHAIS VRLAYGNLEN FDTSNMYRGA RNRSQQGNSG 
QQNSKQSQSP PPPRPDPVGS KDVEWNHTIS PIKAKNGCTI ADFKMPDGTL ADIVIRPGTV 
DGTKLRFKGR SGQGGDFFLK IIVPPMPEQS DREDMDMGAA PWP