Gene Nham_0249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0249 
Symbol 
ID4030997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp278750 
End bp279238 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content65% 
IMG OID637968785 
ProductMarR family transcriptional regulator 
Protein accessionYP_575609 
Protein GI92115880 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.250747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACGCA AACCGTCGAT CGAGGCGGCC GCTGCCTGGA TCCGCCTGAT GCGCGTGCAG 
AGCCGGGTGC TGGATACGGT GGAGCATGAG TTGAAGAAGG CGGGTTTTCC GCCGCTGGCC 
TGCTACGACG CGCTGTTCGA ATTGTCGCGC GCGCCGGCAG GCGAACTGCG GCCGGTCGAA 
CTGGAAAAGC AGATGCTGCG GCCGCAATAC GCGACCTCGC GCCTGATCGA CCGCCTGGTG 
GACGAGGGGC TGGCGGTGCG GCGCGAATGC AAGGTCGACA AGCGCGGCCA GTTCGTCGCG 
ATCACCGACG CCGGACGGGC GTTGCAGAAA AGGATGTGGC AGGCCTATTC GGCGGCGATC 
GAAAAGCATG TCGGCTCCAA ACTCTCCGAC GCCGACGCCA CGAAGCTTTG CGGGCTGCTT 
GACCGGCTCG GTTGTTCCTG CAATGAGGCT CAGGCGCTTG CTGTGAGAGA CGGTGCGTCC 
GCGCGATGA
 
Protein sequence
MRRKPSIEAA AAWIRLMRVQ SRVLDTVEHE LKKAGFPPLA CYDALFELSR APAGELRPVE 
LEKQMLRPQY ATSRLIDRLV DEGLAVRREC KVDKRGQFVA ITDAGRALQK RMWQAYSAAI 
EKHVGSKLSD ADATKLCGLL DRLGCSCNEA QALAVRDGAS AR