| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0203 |
|---|
| Symbol | |
|---|
| ID | 4030663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 226878 |
|---|
| End bp | 228275 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637968738 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_575563 |
|---|
| Protein GI | 92115834 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.678813 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGTTTG TTGCGTGGGG GCGTGACTTG GCGGGGCGGG ACCAAGTTGA GGATGGCAGA
TGGATCGCCG CACCGCGACG CGACCGGCCT GTGGAAGCGC CGCTCCCGGT CTGTCCTGCC
GGCGTTTCTC ACATTCTGCA ATCGAGCAAC GACAACTGGC TGTGCGACCC GGAGCCGGGC
CCGGCGAGCG AACTTGATTG CCTGCGACAC GTTCTCGCTC CGGCTCTGCT GCGCGCGGCC
GAGGCGCGCG GCCGGGAGGT GGGGATCGGC GCGGATCAGG CGCTGATCCG GTCGGGCGTC
ATCAATGAAG ACGCTTACCT GCAAACACTC TCCTCTCACA CCGGTCTTGC GATCGAGACA
TGCGCAGAGG AATCCCGCGC CGATTGCCCC TTGCCCGATC GTCACCTGCC TGGCGCCGCG
GAACACGGAC TGCTTCCGCT GCGCCGGGAT GGGAAGTTGA TCTGGGCGGT CGCACCGCGC
GGTTTCGCCG CGCGACGGCT CTGCCGCCTG ACTGCTGCAT ATCCATCGCT ATGCGACCGG
GTGCGTCTGA CATCGACGCG AGACCTCAAT CAGTTTCTGC TGCGGCAGAC CGGCGACGTG
CTCGGCCAGT CCGCCGCCAA TGCGCTCGGT CGGCGATTCC CGGCGCTGTC CGCCGCGCCG
GTTGCCGACG GTGCCCCCGG CGGGCTGCGG ACAATGCGGC GCCCCGCGCA GACCGGCGCT
CTCGCCGTCA TGATGGTGCT GACGCCAACC TTCGCCCTGG ACATCTTGAG CGACGCGCTG
GCGATATGGT TTCTCGCATT CATCAGCCTG CGGCTTGCGG CCAGCCTGAG ACCGCCGCGC
CCGGCGGTGC GGCTGCCGCG TGTCCCGGAC GGCCGTCTGC CGACCTACAC CGTGATCGCG
GCGCTGTATC GCGAAGCGGC ATCGGTCGCA CCGCTGATGC AGGCCATCGG CGCCCTGGAC
TACCCGCGCG AAAAGCTCGA CGTCATCATC GTGATCGAGC TCGACGATCT CGAAACCCGC
GCCGCTCTTG CGAGGCTCGG CCCGATGCCG CAGGTTCAGG TCCTGCTCGC CTCGGCGGAA
GGGCCGCGCA CCAAACCGAA GGCGCTGAAT TGCGCGCTGC CGTTCGCGCG CGGCAGCTTC
ACCGCCGTGT TCGATGCCGA GGACCGTCCC GATCCGGGCC AGCTCCGCGC CGCGCTCGAC
GCCTTTCGCA TTCAAGGCAC GGACGTGGCC TGCGCTCAGG CCAGTCTCTG CATCGAAAAC
CAGTCCGACA GCTGGCTCTC GCGCATGTTC GCCGCCGAAT ATGCCGGACA GTTCGACGTC
TTTCTTCCGG GACTCGCATC ATTCGGGGTG CCGCTGCCGC TCGGCGGATC GTCGAACCAC
TTCCGCGGTA TTAGGTAG
|
|---|
| Protein sequence | MSFVAWGRDL AGRDQVEDGR WIAAPRRDRP VEAPLPVCPA GVSHILQSSN DNWLCDPEPG
PASELDCLRH VLAPALLRAA EARGREVGIG ADQALIRSGV INEDAYLQTL SSHTGLAIET
CAEESRADCP LPDRHLPGAA EHGLLPLRRD GKLIWAVAPR GFAARRLCRL TAAYPSLCDR
VRLTSTRDLN QFLLRQTGDV LGQSAANALG RRFPALSAAP VADGAPGGLR TMRRPAQTGA
LAVMMVLTPT FALDILSDAL AIWFLAFISL RLAASLRPPR PAVRLPRVPD GRLPTYTVIA
ALYREAASVA PLMQAIGALD YPREKLDVII VIELDDLETR AALARLGPMP QVQVLLASAE
GPRTKPKALN CALPFARGSF TAVFDAEDRP DPGQLRAALD AFRIQGTDVA CAQASLCIEN
QSDSWLSRMF AAEYAGQFDV FLPGLASFGV PLPLGGSSNH FRGIR
|
|---|
| |