| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0187 |
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| Symbol | |
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| ID | 4030781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 206930 |
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| End bp | 208279 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637968723 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_575548 |
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| Protein GI | 92115819 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCG CGCGACCGCT GTGGCAGGCG TACCTCGCCT TCCTGATGCC GATGATGCTG
AGCAACGTGC TCCAGGCGCT GTTCGGCACC ATCAACGGCA TCTACCTCGG CCAGATGATC
GGCGTCGATG CGCTCGCCGC CGCCTCGATT TTCTTTCCGA TGATGTTCTT CTTCATCTCC
TTCATCATCG GGCTCGGCGC GGGCTCGTCG GTGCTGATCG GTCAGGCATG GGGCGCGCGC
GCCGTCGGCA AGGCGAAGGC GATCGCCGGA ACCACGCTGG CGCTGACATT GCTCGGTGGC
TGCGTGATCG CGATCGGCGG CGGCGTATTC GCGCGCGATC TGATGATGGC GCTGGCGACA
CCGCCCAACA TTCTCGACGC CGCGACCGAC TACGCCCGCA TCATGATGAT CACCATGCCG
GCGACGTTCA CCTTCCTGCT CGCCACCGCG ATGATGCGCG GCGTCGGTGA CACCGTCACG
CCGCTGTGGG CGCTTGCGAT CTCGACGCTG ATCGGGCTCG TGGTCACGCC GGCGCTGATC
CGGGGATGGT TCGGACTGCC CCAGTTCGGC GTCGCCAGCG CCGCGATCGC GTCCGCGATC
TCGGCGGTCG TGACGCTGTT GTGGCTCGGT GTGCACATGC GACGGATGAA TCATCCGCTG
GCGCCGGATG CAGCGCTTCT GCGCGCCATG CGGCTCGATC GCGAACTGCT CGGCAAGGTG
CTGCGCATCG GAGTGCCCAC CGCGGTGCAG ATGGTGGTGA TGTCGCTCGC GGAAATCGTC
CTGCTCGGCA TCGTCAACAG GTTCGGCTCC GATGCCACCG CCGCCTATGG CGCAGTCAAC
CAGGTGCTGA GCTATGTGCA ATTCCCGGCG ATCTCGATCG CCATCACCGC GTCGATCTTC
GCGGCGCAGG CGATCGGCGC AGGCCAAACC GGGCGGATCG GCGCGATCGT CCGCACCGGG
ATCTGGCTCA ACCTGCTTTT GACCGGCGGC CTTGTCGCGC TCGGCTATCT GCTGTCGCGG
ATCATCATCG GACTTTTCAT CACCAATCCC GAGGTGCTCG ATCTGGCGCA GACGCTGCTG
TTCATCGTGC TCTGGAGCAC GGTTCCGTTC GGCATGGCTG GCGTGTTCTC GGCCACCATG
CGCGCGAGCG GCACGGTGCT GGTGCCGACG CTGCTGTCGA TTCTCGCCAT CGTCGCGGTC
GAGGTGCCCG TTGCGATGGT GCTCAGCCAT CGCATCGGCG TCGAGGGCGT CTGGATCGCC
TATCCCGCCG CGTTCTGCAC CATGATGGTG CTGCAGATGG CCTTCTACCT GATGGTCTGG
CGCAAGCGTG AGATCAAGCG ATTGATCTGA
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| Protein sequence | MTTARPLWQA YLAFLMPMML SNVLQALFGT INGIYLGQMI GVDALAAASI FFPMMFFFIS
FIIGLGAGSS VLIGQAWGAR AVGKAKAIAG TTLALTLLGG CVIAIGGGVF ARDLMMALAT
PPNILDAATD YARIMMITMP ATFTFLLATA MMRGVGDTVT PLWALAISTL IGLVVTPALI
RGWFGLPQFG VASAAIASAI SAVVTLLWLG VHMRRMNHPL APDAALLRAM RLDRELLGKV
LRIGVPTAVQ MVVMSLAEIV LLGIVNRFGS DATAAYGAVN QVLSYVQFPA ISIAITASIF
AAQAIGAGQT GRIGAIVRTG IWLNLLLTGG LVALGYLLSR IIIGLFITNP EVLDLAQTLL
FIVLWSTVPF GMAGVFSATM RASGTVLVPT LLSILAIVAV EVPVAMVLSH RIGVEGVWIA
YPAAFCTMMV LQMAFYLMVW RKREIKRLI
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