| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0162 |
|---|
| Symbol | |
|---|
| ID | 4029318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 182236 |
|---|
| End bp | 183024 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637968696 |
|---|
| Product | endonuclease III |
|---|
| Protein accession | YP_575523 |
|---|
| Protein GI | 92115794 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
|---|
| TIGRFAM ID | [TIGR01083] endonuclease III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.562877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGGCAGG CTCCGGCGGC AAAACCGCGG AAACGGGCGG CGACACCCGA GGCCGGGGCC
GCCTCCAAGG CCATCCTGCC CGCCGCCAAG CGGCCCGCCA AGCCGGCACG TCGGTCGGCA
CGTGGGTCGG CGGCGCCCAC GCCGCCCCTC AGGCCCTGGA CGGTGGCCGA AATCCGGGAA
GCCTTCGTGC GGTTCCGCAA CGCCAATCCC GAGCCGAAGG GCGAACTCGA GCACCTCAAC
CCCTACACGC TGCTGGTCGC GGTGGTGCTG TCGGCTCAGG CGACCGACGC CGGTGTCAAC
AAGGCGACTC GTGCCCTGTT CGCGGTCGCC GATACGCCCG CCAGGATGCT GGCGCTCGGC
GAGGAGAAGG TCCGCGATCA CATCAAAACC ATCGGGCTCT ATCGCAACAA GGCGAGGAAC
ATCATCGCGC TGTCGGAAAA ACTGCTCGCG GACTTCAATG GCGAAGTCCC GCGCAGCCGC
GCCGGGATCG AATCGCTGCC CGGCGCGGGA CGCAAGACCG CCAACGTCGT GCTCAACATG
GCGTTCGGAG AGCACACAAT GGCGGTTGAC ACCCATGTCT TCCGCGTCGG CAACCGTACC
GGCATGGCGC CGGGCAAGAC GCCGCTCGAG GTCGAACTCG GACTTGAGCG CGTGATCCCG
GACGAGTTCA TGCTGCATGC GCATCACTGG CTGATCCTGC ACGGACGCTA CACCTGCCTG
GCGCGATCGC CGCGCTGCGC GGTGTGCTTG ATCAACGACC TGTGCCGCTG GCCGGAAAAA
ACGATCTAA
|
|---|
| Protein sequence | MGQAPAAKPR KRAATPEAGA ASKAILPAAK RPAKPARRSA RGSAAPTPPL RPWTVAEIRE
AFVRFRNANP EPKGELEHLN PYTLLVAVVL SAQATDAGVN KATRALFAVA DTPARMLALG
EEKVRDHIKT IGLYRNKARN IIALSEKLLA DFNGEVPRSR AGIESLPGAG RKTANVVLNM
AFGEHTMAVD THVFRVGNRT GMAPGKTPLE VELGLERVIP DEFMLHAHHW LILHGRYTCL
ARSPRCAVCL INDLCRWPEK TI
|
|---|
| |