Gene Csal_3310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3310 
Symbol 
ID4028855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3686987 
End bp3687865 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content65% 
IMG OID637968525 
Producthypothetical protein 
Protein accessionYP_575353 
Protein GI92115425 
COG category[R] General function prediction only 
COG ID[COG2961] Protein involved in catabolism of external DNA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCCCGC CACGATGTTC GAGAATTGCC ATGCTCGCCT ACCAGCACGC CTATCACGCC 
GGCAACTTCG CCGACGTGCA CAAGCATTTG ACCCTGTTTG CCGTCCTCCA GTACTTGTTA
CGTAAGTCAT CCGCCATTAC GTATGTCGAT ACGCATGCCG GGCGTGGTCT TTACCCTCTC
GAAGCCGAGG AAACCCAGCG CTTGCGGGAG TATCGTCAGG GCGCAGCTGC CGTATGGGCG
GCACGCGAGG TGCTCGCCGA CGATTCGCTG CTCGCGGCGT GGTGCGAGCG GCTCGGCGAT
GCCCAGTCCG GGGCATCGAC GCTCAGCCAT TACCCCGGAT CGCCCTGGTG GCTGGCGAAC
GACTGTCGCG AGCAGGATCG CCTGGCGTTA TTCGAGCTGC ATCCAGGCGA AGCGACCCAT
CTCGAGGCAC AAGTGCTGCC GCCTCAGGCG CGACGTCAGC ATGCGGACGG CCTGGCCGGC
ATTCGTGCGC TGCTGCCACC CGCCACGCCG CGATTCTGTG CACTCATCGA TCCCAGCTAC
GAGCGCAAGC AGGAATACAC CGACGTCGCG GCTACTCTGC AAGCCGTCGC CGCCAAGGTG
CGTCATGCCA TCGTGATGAT CTGGTATCCG TTGCTGCCCA GCGGTCGTCA TCATGACCTG
CTGACGGCCG CTCGGCGCAG CGGCCTCCGC AAGCTATGGC GCAGCGAGCT GACGCTTCAC
CCGCCCGGCG AAGCCACCCA TGGGATGTAC GGCAGCGGCA TGCTGCTTCT CAATCCTCCC
TGGGGCATCG ACACGCAATT GAACGCGAGC CTGACCCGCG TCGCGTCTTG CCTGGGCGAT
ACGGCCTCGC ATGTCTCGCA GTGGTGGGTG CCGGAGTGA
 
Protein sequence
MVPPRCSRIA MLAYQHAYHA GNFADVHKHL TLFAVLQYLL RKSSAITYVD THAGRGLYPL 
EAEETQRLRE YRQGAAAVWA AREVLADDSL LAAWCERLGD AQSGASTLSH YPGSPWWLAN
DCREQDRLAL FELHPGEATH LEAQVLPPQA RRQHADGLAG IRALLPPATP RFCALIDPSY
ERKQEYTDVA ATLQAVAAKV RHAIVMIWYP LLPSGRHHDL LTAARRSGLR KLWRSELTLH
PPGEATHGMY GSGMLLLNPP WGIDTQLNAS LTRVASCLGD TASHVSQWWV PE