Gene Csal_3240 details

Gene Information

• Locus tag: Csal_3240
• ID: 4028574
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 3612640
• End bp: 3613164
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637968455
• Product: 2',5' RNA ligase
• Protein accession: YP_575283
• Protein GI: 92115355
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1514] 2'-5' RNA ligase
• TIGRFAM ID: [TIGR02258] 2'-5' RNA ligase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCGTTT CTCGCCGACT CTTCTTCGCC CTGTGGCCCG ACGACACCAC TCGCCGGGCG 
CTGGCCGCCG AGGCTCAGCG CCTGGCGCCA CTCTGCGGCG GCTACCCGCT GCCCGCGGAG 
AACATGCATA TCACGCTGGC GTTTCTGGGC AATGTCGACG AGGCCCGAAT CGCCCCACTC 
GTCGCCCTCG CGCAGGCCTG GCCGGCGCTG CAGGGCGAGT GGACGCTGGA TCGGCTGGGG 
CATTTCCCCA AGCCCCGCAT CGTCTGGGCG GGCAGCCAGG CGTCGAGTCC CGAGCTGATG 
GCGCTCGATG CCGAGCTCTG GCAGGCGCTG GCCCGTCATG GCTTCACCGC GCCGCAGCGT 
GACTTCACCC CGCATGTCAG CCTGGTGCGC CAGGCCGACC GCGCGGCACC GGCGTCACGG 
CTGCCCACCC CGATCCGCTG GCGCTTCGAC CGTCTCGCCC TGGTGGAATC GCAGCTCGAC 
AATGGTGGCT CGCGCTATCG GACGTTGGCG TGCGGTGTCG ATTGA 

 

Protein sequence

MTVSRRLFFA LWPDDTTRRA LAAEAQRLAP LCGGYPLPAE NMHITLAFLG NVDEARIAPL 
VALAQAWPAL QGEWTLDRLG HFPKPRIVWA GSQASSPELM ALDAELWQAL ARHGFTAPQR 
DFTPHVSLVR QADRAAPASR LPTPIRWRFD RLALVESQLD NGGSRYRTLA CGVD