Gene Csal_3232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3232 
Symbol 
ID4028566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3601701 
End bp3602894 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content70% 
IMG OID637968447 
Productmajor facilitator transporter 
Protein accessionYP_575275 
Protein GI92115347 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCATG CCGATGCGAC CCCCCGACTC GCCTTTGCCG GGGTGGCCTT TGCCTTTCTC 
GTCACCATGC TGGGGACGAC CTTGCCGACA CCGCTGTACC CGGGGTATCA AACCGCCTTC
GGCTTTTCCC AGCTCATCAT CACGGTGATC TTCGCCGCCT ATGCCGTGGG CGTGATTGCG
GCACTGCTGG TGGCCGGTCG CTGGTCCGAT CAGCTGGGAC GTCGGCCGTT GCTTTTCGCC
GGCCTGACGG CAGCGGCGCT CAGCGACCTC GTCTTCCTGG GGGCCGAGGG ATTGTCGTCG
CTGCTGGCCG GGCGTGTGCT GTCGGGCATG TCGGCCGGCA TCTTCACCGG CACCGCCACG
GTGGCCGTGG TCGAGTCGGC ACCGGTGGCC TGGAAACGCA CCGCGACCTT CGTGGCCACC
GCCGCCAACA TGGGCGGTCT GGGGCTGGGG CCGGTGGTCG CCGGGGCGCT GGCCGAATAC
GTGGCCTGGC CGCTGCATCT GGCCTATGCC GTGCATCTGG GACTGCTGGT GATAGCCGTG
CTGGGGGTCG CCGTGGCGGC GGAGACCGTG ACGCGACCGC CCCGGATTCG CCTGCGCGTT
CAGCGCCTGA AGGTTCCCGC CGAGGTGCGC GGTGTCTTCA TGCCGGCGGT GATCGCGGGC
TTTGCCGGTT TCGCGGTCCT GGGGTTCTTC ACCGCGACGG CGCCGGCCTT CATGGCACAG
GTGCTGGGTC ACGATAACCT GCTGGCCATC GGCCTGGTGG CGGGCTGCGT GTTCTTCGCC
TCGACCCTGG GACAGCTGGC GCAGGACCGC CTGCCGCCCG CCCGGCGATT GCCGCTGGGG
TGTGCCGTGG TGATCGTCGG CGCACTGGTC GTCGGCGCCG GCCTGGCCCT GGCGACACTC
TGGGGCTTCC TGCTGGGGGC GCTGATCGTC GGTCTGGGGC AGGGGATCGC GTTTCGTGCC
GGGCTGGGTG CGGTGGCCGC GGCCTGCCCG ATGAACCAGC GTGGCGCGGT GACCTCGACC
TTCTTCGTCA TCGTCTATGT GGCGATCTCG ATTCCCGTGG TGGGCATCGG CGTGGTGGCA
CGCCTCGTCG GCCTGCAAGC CACCGGCGTG GGATTCGCCA TCGGCGTGGC CCTCCTTGCC
GGCGTGGCGC TGGTATCATT GCAACGTCGT CGCGCCGCCG CGGTGGCCGA CTGA
 
Protein sequence
MSHADATPRL AFAGVAFAFL VTMLGTTLPT PLYPGYQTAF GFSQLIITVI FAAYAVGVIA 
ALLVAGRWSD QLGRRPLLFA GLTAAALSDL VFLGAEGLSS LLAGRVLSGM SAGIFTGTAT
VAVVESAPVA WKRTATFVAT AANMGGLGLG PVVAGALAEY VAWPLHLAYA VHLGLLVIAV
LGVAVAAETV TRPPRIRLRV QRLKVPAEVR GVFMPAVIAG FAGFAVLGFF TATAPAFMAQ
VLGHDNLLAI GLVAGCVFFA STLGQLAQDR LPPARRLPLG CAVVIVGALV VGAGLALATL
WGFLLGALIV GLGQGIAFRA GLGAVAAACP MNQRGAVTST FFVIVYVAIS IPVVGIGVVA
RLVGLQATGV GFAIGVALLA GVALVSLQRR RAAAVAD