| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_3165 |
|---|
| Symbol | |
|---|
| ID | 4028632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 3529447 |
|---|
| End bp | 3530331 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637968379 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_575208 |
|---|
| Protein GI | 92115280 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.165989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGATA TCAAGTATTA CGTATTGATC GACGCCATCG CGACCCACGG CACGGTGCAC
GATGCCGCCG CCGCCATCGG CATCACCCAG CCCGCGGCGA CGCATCGCAT TCGGGAAATG
GAACGCCGCC TGGGCGTTGC GCTGTTCCAT CGCGAAGGCC GTCGGCTGAC GCTTTCCGCC
TCGGGCGAGC GTCTGCTCGA CACCGCTCAT GCGGTACTCC CCCAGTTGCG CAACGCCGAG
CTCGAGGCAT GGCAGCTGGC TCGCCGCGCC GAGCCCGCCC TGCGCCTGGG CATCGGCCCC
TACGACACCT TCTCGCGGGC GATCCCGCAT CTCTACGACC AGCATGAGCG CGACATCGAC
CTGGTGCGCT TGCCCATGGC GGACATGACC ACGGCCCTGC TCGCCAACCG GGTCGACATG
ATCTGCATGA TCGAAGTCCC TTCGCAGCGC GGGATCGCTC ACCAGTTGCT GTTCGAGGAG
CCACTGGTGG CCGTGCTGCC CCCCGACCAC CCCGACGCGC AGAGCGACAC CATCCCCGCC
GAGGTATTCG ACCGGGGACG ACACTTCACC TACAGCATCA CGCCCGAGTC CGGCCACGAG
TTCGAGCACT TCTTCCAGCC CGCCGGCGTC TATCCCTCGC ACATGGTACA GATCGAGTCG
GTCGCCCTGA TCCTCGAGCT GGTCGCCGCC GGCAAGGGCG TGAGCATCCT GTCGCGCTGG
GCCGCCCGGG ACGCCCATCA GGCCGGGCAC GTCGTCATGC GCCCCCTGGC CGGCGACATC
CCGCGCATTC CCTGGTACCT GGCCTATACG CAGACGCCCC ACATCGCCGC CGTCGCCGAA
CCACTGGCGG ACACGCTACG CCATCTCTAT CGCGCCGATG AGTGA
|
|---|
| Protein sequence | MLDIKYYVLI DAIATHGTVH DAAAAIGITQ PAATHRIREM ERRLGVALFH REGRRLTLSA
SGERLLDTAH AVLPQLRNAE LEAWQLARRA EPALRLGIGP YDTFSRAIPH LYDQHERDID
LVRLPMADMT TALLANRVDM ICMIEVPSQR GIAHQLLFEE PLVAVLPPDH PDAQSDTIPA
EVFDRGRHFT YSITPESGHE FEHFFQPAGV YPSHMVQIES VALILELVAA GKGVSILSRW
AARDAHQAGH VVMRPLAGDI PRIPWYLAYT QTPHIAAVAE PLADTLRHLY RADE
|
|---|
| |