Gene Csal_3010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_3010 
Symbol 
ID4028976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp3352078 
End bp3353400 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content65% 
IMG OID637968216 
Producthomoserine dehydrogenase 
Protein accessionYP_575053 
Protein GI92115125 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0460] Homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.448241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGTTGA AACCGGTGAG AGTAGGTATC TGTGGGCTAG GGACCGTGGG TGGCGGTACC 
TTCAATGTGT TGACGCGCAA CGCGGACGAC ATCGCGCGTC GCGCCAGCCG GCCGATCGTG
GTCGAGCAGG TTGGCGCGCG TCGCGACAAC CCGCAATGCG AGACCGCCGG GGTCAAGGTC
ACCCGTGACG TCTTCGAAGT GGCCCGCAAC CCGGATGTCG ATGTGCTGGT CGAACTGATC
GGCGGCTATG ACGTGGCACG CGAACTGGTG ATGACCGCCA TCGAGCATGG CAAGCACGTG
GTCACCGCCA ACAAGGCACT GATCGCCGTT CACGGCAACG AGATCTTCCA GGCGGCGCAC
GAAAAGGGCG TGATCGTGGC CTTCGAGGCG GCCGTGGCGG GCGGCATTCC GGTGATCAAG
TCCCTGCGCG AGGGGCTGGG TGCCAACCGC ATCCAGTGGC TGGCCGGCAT CATCAACGGT
ACCGGCAACT ACATCCTCAC TCACATGCGC GACGAGGGCC GTGCCTTCGA CGACGTGCTC
GCCGAAGCGC AGGCCCTGGG CTATGCCGAG AGCGATCCCA CCTTCGACGT CGAAGGCATC
GACGCCGCGC ACAAGCTGAC GATTCTCGCC TCGATCGCCT TCGGTGTGCC GCTGCAGTTC
GACAAGGCCT ACACCGAAGG CATTTCGCGG GTCACCGCCG AGGATGTCGA GCAGGCCGAC
CAGCTGGGTT ACGTCATCAA GCACCTGGGG ATTTCCAAGC GCACCGACAA TGGCCTCGAG
CTGCGCGTGC ACCCGACGTT GATTCCCAAG GAACGTCTGC TGGCCAGCGT GCATGGCGTG
AAGAACGCCA TTGCCGTGAT GGGCGATGCC GTGGGCCCGA CCCTGTACTA TGGTGCCGGC
GCGGGAGCCG AACCCACGGC CTCGGCGGTG GTCGCCGACC TGCTCGACGT GGCCCGCGAC
ATCACCACCG AGCATCATTA TCGCGTGCCG TACCTGGCCT TCAGCGGCAT CGACGAAGCC
GATGGTTCGT TGCCGATCCT GCCCATGGAA GACATCGTCA CCGCCTATTA CCTGCGTCTG
CTGGCGGTGG ACCGCCCGGG CGTGCTGGCA CGGGTGGCGA CGATTCTCTC CGAGCAGGGG
ATCTCCATCG AGGCGATCAT CCAGAAGGAG GCCATCGAGG GAGAACTGGT CCCCATCATC
CTGATGACGC ATCGCACGCG CGAGCAGCAC ATGAACGAGG CGATCCGCCA GCTCGAGTCG
CTGGCCGATA TCGCCGGACC GGTGAACCGC ATCCGGGTCG AGTCGCTCGA CGAGAACGAA
TAA
 
Protein sequence
MTLKPVRVGI CGLGTVGGGT FNVLTRNADD IARRASRPIV VEQVGARRDN PQCETAGVKV 
TRDVFEVARN PDVDVLVELI GGYDVARELV MTAIEHGKHV VTANKALIAV HGNEIFQAAH
EKGVIVAFEA AVAGGIPVIK SLREGLGANR IQWLAGIING TGNYILTHMR DEGRAFDDVL
AEAQALGYAE SDPTFDVEGI DAAHKLTILA SIAFGVPLQF DKAYTEGISR VTAEDVEQAD
QLGYVIKHLG ISKRTDNGLE LRVHPTLIPK ERLLASVHGV KNAIAVMGDA VGPTLYYGAG
AGAEPTASAV VADLLDVARD ITTEHHYRVP YLAFSGIDEA DGSLPILPME DIVTAYYLRL
LAVDRPGVLA RVATILSEQG ISIEAIIQKE AIEGELVPII LMTHRTREQH MNEAIRQLES
LADIAGPVNR IRVESLDENE