| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2882 |
|---|
| Symbol | |
|---|
| ID | 4027890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 3212746 |
|---|
| End bp | 3213693 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637968090 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_574927 |
|---|
| Protein GI | 92114999 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.241105 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCTA TGCTGGACAG AACTCTCCCA TCAGTAAAAC GAGTCATTTC AATGGCAGCC
ATCGGGAATA CCGATAGTAC GGCGCTGGCC GCGCTGGACA GCGATCTGCT GCTGGCCTTC
GTCACCGTGG CCGACAGCGG CGGTTTCACC GCCGCGGCGC GTTACCTGCA CAAGACGCAG
TCGACCATCA GCCTGCGCAT CAGCACGCTC GAGTCGCGCC TCGGCACCTT GCTGATCGAG
CGTGGCAGCC GTCGACTCAC GTTGACCGGC GATGGCGAGA CCTTCCTCGT CTACGCACGG
CGCCTGCTGC AGCTGCAGCG CGAGGCGATC GCGGCGCTGG GGCGCTCCCA GCCGGTGACG
CTGCGCTTCG GCATCCCCGA GGACTATGCC GATACCTGGT TGCCGGCATT GCTCGAACGC
TTCGGCGCCC GGCATCCCGA CGTTCATGTG CATATCCACT GCCGCATGTC GACGGAACTG
CTGGAACAAT TGGAGAAAGG CTCGCTGGAT ATCGTGCTGG CGGTGCAGCA CGCCGCGGAC
AGTGGAGGGC GGCCCGTGGC CACGGAGGAC GTGGTCTGGG CGGCGCATCG GCGTTTTGCG
CTCGACCCCG GGCGGCCGAT TCCGCTGGCG CTGTTCCCGG AGCAGTGCAT TTACCGGCGC
CGGGCGCTGG CCGCGCTGGC CGGCATCGGT CGCGACTGGC AACTCGACTC CACCAGTCAG
AGTCCGAGCG GTTTGCGCGT CATCGTCAAT CAGGGCCAGA CACTGACCGT GACCGACCGT
CGCTCGTTAC CCGAGGACTG GCAAGCGCTG GGGGAAGAGG AGGGCCTGCC GTCGCTGCCC
CCCGCCGTGA TCGAAGTACA CCGTTCCCCG AGCCTGACGC ACCCCGCCTT CGACGATTTC
GTCGCGCTGA TCGACGAGGT GCTGGAAGAG AGCGGCGTGG CGGAGTGA
|
|---|
| Protein sequence | MSSMLDRTLP SVKRVISMAA IGNTDSTALA ALDSDLLLAF VTVADSGGFT AAARYLHKTQ
STISLRISTL ESRLGTLLIE RGSRRLTLTG DGETFLVYAR RLLQLQREAI AALGRSQPVT
LRFGIPEDYA DTWLPALLER FGARHPDVHV HIHCRMSTEL LEQLEKGSLD IVLAVQHAAD
SGGRPVATED VVWAAHRRFA LDPGRPIPLA LFPEQCIYRR RALAALAGIG RDWQLDSTSQ
SPSGLRVIVN QGQTLTVTDR RSLPEDWQAL GEEEGLPSLP PAVIEVHRSP SLTHPAFDDF
VALIDEVLEE SGVAE
|
|---|
| |