| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2875 |
|---|
| Symbol | |
|---|
| ID | 4028677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 3207089 |
|---|
| End bp | 3208303 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637968083 |
|---|
| Product | TraB family protein |
|---|
| Protein accession | YP_574920 |
|---|
| Protein GI | 92114992 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
|---|
| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.926692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATA CACCCGCCGG CCCGCGTCAG GTCATCGATC AGGGCGAGAC CCGTTACACC
CTGCTGGGCA CCGCCCACGT CTCGCGCGCC AGCGCCGACG AAGTCCGCGA ATTGATCCGT
TCCGGCGAGT TCGATGCCGT CGCCATCGAG CTGTGCCCCA CCCGCTACCA GAGCGCGACC
CAGCCCGACG CCATGGCCAA GATGGATCTC TTCCAGGTCC TGCGCCAGGG CAAGGCCGGC
ATGGTCGCCG CCAGCCTGGC CCTGGGCGCC TTTCAGCAAC GCGTCGCCGA GCAGTCCGGC
GTGACGCCCG GCGCCGAGAT GCAGATGGCG ATCAAGGAGG CCCGCCGCGC CGACCTGCCG
CTGTACCTGG TCGACCGCGA CATCGGCGTG ACGCTGAAGC GCATCTATCA CAGCGTGCCC
TGGTGGCAGC GCATGAGTCT GGTCTCGGGC TTGCTGGGCA GCGTGGTATC GCGCAAGAAG
GTCTCCAGCG AGGAAATCGA GCGACTCAAG GAAGGCGATG TCCTCGAGTC GACCTTCGCC
GAGTTCGCCG AGCAGTCGGA ATCGCTCTAC ACGCCGCTGA TTCGCGAGCG CGATCGCTAC
ATGGCCCTGC GCCTGCGCGA GGAGGTCAAA GGCGAGACGC CGCGCCACAT CCTGGTGGTG
GTCGGCGCCG GGCACCTGAA GGGCCTCGGG GAGCACATCG AGACGCTGGG CCAGCAACCG
CCGAGCGCCG AAGCGCTCGA CCAGGAACGC CACGCCCTGG AAGTCACGCC GCCCCGTTCC
AGGCTCTGGA AGATGCTGCC CTGGGTCATC GTCGCGCTGG TGCTGACCGG CTTCGCCATC
GGCTTCTCGC GGGATACCGA GCTCGGCTGG TCGCTGGTCG GCGAGTGGTT CTTGATCAAC
GGCGTCCTCT CGGCGCTGGG CACCGCCATC GCGCTGGCCC ATCCACTGAC CATCGTCGCG
ACCTTCTTCG CCGCGCCCTT GACGTCGCTC AACCCGACCA TCGGCGCCGG TTTCGTCGCC
GCCGGCGTCG AACTGGCCCT GCGCCGCCCC ACCGTGGGTG ACTTCTCGCG CCTGCGCCGC
GACGTCAGCT CACCGCGCGG CTGGTGGAAG AACCGCGTCG CTCGCACGCT GCTGGTCTTT
TTGCTCGCCA CGCTGGGCTC CGCCGCCGGC ACCTGGATCG CCGGGCTGCG TATCGCCGGG
CAGCTTTTCG GGTAA
|
|---|
| Protein sequence | MPDTPAGPRQ VIDQGETRYT LLGTAHVSRA SADEVRELIR SGEFDAVAIE LCPTRYQSAT
QPDAMAKMDL FQVLRQGKAG MVAASLALGA FQQRVAEQSG VTPGAEMQMA IKEARRADLP
LYLVDRDIGV TLKRIYHSVP WWQRMSLVSG LLGSVVSRKK VSSEEIERLK EGDVLESTFA
EFAEQSESLY TPLIRERDRY MALRLREEVK GETPRHILVV VGAGHLKGLG EHIETLGQQP
PSAEALDQER HALEVTPPRS RLWKMLPWVI VALVLTGFAI GFSRDTELGW SLVGEWFLIN
GVLSALGTAI ALAHPLTIVA TFFAAPLTSL NPTIGAGFVA AGVELALRRP TVGDFSRLRR
DVSSPRGWWK NRVARTLLVF LLATLGSAAG TWIAGLRIAG QLFG
|
|---|
| |