Gene Csal_2501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2501 
Symbol 
ID4026907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2810270 
End bp2810845 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content64% 
IMG OID637967708 
Productexopolysaccharide synthesis, ExoD 
Protein accessionYP_574547 
Protein GI92114619 
COG category[R] General function prediction only 
COG ID[COG3932] Uncharacterized ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00116546 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATCGC GCATTAGTTT GACCCAGCTG CTGGAAAAGC TCGACGACGC CAATGATGGC 
AGGACGATCC ATCTTCAGGA TGTCGTCGAT ACCTTCCAGT CGCGGGGATT CGGGCCGCTG
GTGACGCTGC CGGCCTTGCT GGCGCTGTTG CCCACCGGGG GGGTGCCGGG CGTGCCCACC
TTGTGTGCCA TTTTCATCGC GTTGATCGCC GTCCAGCAGC TGTTCGGCCG TCAGTCGCCC
TGGTTGCCAA GGAAGCTGCG CGAACGCGGC ATCAGCCACG ACAAGCTGCA TCGCAGCGTC
GAACGCGTAC GGCCGTGGAC ACGTCGCATC GACAGGTTGC TGGCGCAACG CCTGGACATC
CTGTTGCAGC CCGTGGCGCG TCGCTTCATC GCGGTGCTGG TCATCGCCCT GGCCTTGGCG
ATGATACCGC TGGAGTTGTT GCCCTTTGCC GCCGCGATGC CGGCGCTGGC GATTACCGTG
ATCGGCCTGG GCATGACGGC CGACGACGGT CTTTTGTTGC TGATCGGCGT ATTGCTTGCC
GCCGGTCTGG CCGTGAGCGC CTACTGGCTA TTGTGA
 
Protein sequence
MESRISLTQL LEKLDDANDG RTIHLQDVVD TFQSRGFGPL VTLPALLALL PTGGVPGVPT 
LCAIFIALIA VQQLFGRQSP WLPRKLRERG ISHDKLHRSV ERVRPWTRRI DRLLAQRLDI
LLQPVARRFI AVLVIALALA MIPLELLPFA AAMPALAITV IGLGMTADDG LLLLIGVLLA
AGLAVSAYWL L