Gene Csal_2392 details

Gene Information

• Locus tag: Csal_2392
• Symbol: fadA
• ID: 4026829
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: -
• Start bp: 2681992
• End bp: 2683170
• Gene Length: 1179 bp
• Protein Length: 392 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637967594
• Product: 3-ketoacyl-CoA thiolase
• Protein accession: YP_574438
• Protein GI: 92114510
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0183] Acetyl-CoA acetyltransferase
• TIGRFAM ID: [TIGR01930] acetyl-CoA acetyltransferases; [TIGR02445] fatty oxidation complex, beta subunit FadA

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTGA ATCCCAGAGA TATCGTGGTG GTCGATGCCG TCCGGACCGC CATGGCCAAG 
GCCAAGCACG GCGCTTTCCG CAACGTACGT GCCGAAAACC TCTCCGCCGC GGTGATGCAG 
GCACTGTTCG ATCGCAACGC CAACCTGGTC CCCGCCGAGG TCGACGACGT GATCTGGGGG 
TGCGTCAATC AGACCCTCGA GCAGTCCATG AACATCGCGC GCAATGCCGC GATCATGACC 
GGCATTCCCC GTACGGTGCC GGCACAGACG GTCAATCGCC TGTGCGGTTC GTCGATGAGC 
GCGCTGCACA TCGCCACGGC CAACATCAAG GCCGGCATGG GCGACTTCTA CATCATCGGC 
GGCGTCGAGC ACATGGAGCA CGTGCCCATG ACGCACGGCG TCGACGTCAA CCCGGCAGCC 
AGCAAGTACG CCGCCAAGGC CGCCATGATG ATGGGGCTGA CCGCCGAGCT GCTGGGCAAG 
ATGCACGGCG TCGGCCGCGA GGAGCAGGAT GCGTTCGGCG TGCGCTCGCA TCAGCGCGCG 
CAGGCCGCCA ACGAGAACGG CTACTTCGAC AACGAGATCG TCGGCGTCGA AGGGCACGAT 
GCGGATGGCT TCCTGCGCCT GATCGATCGC GACGAGGTGA TTCGTCAAGA CGCCAACCTG 
GAAGACATGG GCAAGCTCAA GCCGGTCTTC GATCCCAAGG GAGGCACGGT CACGGCGGGC 
ACGTCCTCGG CATTGTCCGT GGGCGCCTCG GCGCTGGCGG TGATGAGCTA CGAGCGTGCC 
CAGGCACTGG GACTCGAGCC GCTGGCCCGG GTGGTCTCCA CGGGCGTCGC CGGCTGTGAC 
GCCTCGATCA TGGGGTACGG CCCGGTGCCG GCGACGCAGA AGGCGCTCAA GAGTGCGGGA 
CTGGCCATCG ACGACATCCA GACGGTCGAG CTCAACGAGG CGTTCGCCGC GCAATCGATT 
CCCGTGCTCA AGGATCTCGG CCTGCGCGAG CGCATGGACG ACGCCGTCAA CCTGCATGGC 
GGCGCCATCG CCCTGGGCCA CCCGCTGGGC TGCTCCGGGG CTCGCATCTG CACCACGCTG 
CTCAACGTCA TGCGTCAGCA GGACACCACC CTGGGCCTGG CGACCATGTG CATCGGCATG 
GGCCAGGGCG TGGCGACCGT GTTCGAGCGT CTGAAGTAA 

 

Protein sequence

MSLNPRDIVV VDAVRTAMAK AKHGAFRNVR AENLSAAVMQ ALFDRNANLV PAEVDDVIWG 
CVNQTLEQSM NIARNAAIMT GIPRTVPAQT VNRLCGSSMS ALHIATANIK AGMGDFYIIG 
GVEHMEHVPM THGVDVNPAA SKYAAKAAMM MGLTAELLGK MHGVGREEQD AFGVRSHQRA 
QAANENGYFD NEIVGVEGHD ADGFLRLIDR DEVIRQDANL EDMGKLKPVF DPKGGTVTAG 
TSSALSVGAS ALAVMSYERA QALGLEPLAR VVSTGVAGCD ASIMGYGPVP ATQKALKSAG 
LAIDDIQTVE LNEAFAAQSI PVLKDLGLRE RMDDAVNLHG GAIALGHPLG CSGARICTTL 
LNVMRQQDTT LGLATMCIGM GQGVATVFER LK