Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_2271 |
Symbol | |
ID | 4026424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 2552140 |
End bp | 2553975 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637967475 |
Product | hypothetical protein |
Protein accession | YP_574320 |
Protein GI | 92114392 |
COG category | [S] Function unknown |
COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCGACG ACCTGCTTCC CTATTACGAG AAGGAACTCT CGCACCTGCG CTTCTTGGGG CAGGAGTTCG CTCAACGGTA TCCCAAGATC GCCTCGCGTC TGCTGCTCGA GGGGGACGAT TGTGAAGATC CCCATGCCGA GCGCATGATC GAATCGTTCG CGTTCCTCAG TGCCCGTGTG CACAAGAAAC TCGACGATGA CTTCCCCGAG ATCGTCGAAT CCTTTCTCGA CGTGCTCTAC CCGCACTATC TACGCCCGAC ACCGGCGCTG TCGATCGTCG AATTCGATCC CGGCGCACAG ACCTCCTTGA CGGGGGCCTA TCACCTGCCC CGGCATACCG CACTGCACTC GCGGCCGGTC GGGGATACTT TCTGCCGTTT TCGCACCTGC TATCCGGTGG ATGTCTGGCC GGTGGCAATG AGCGGTGCCG AACTCTCCCG GCTGGAGCGC TCATCGTTCA ACGCCCATGG CAACGATAAC GTGGCCAGGC TCAGCCTGAC GCTGGACAGT CTCGGCAACA CCGACTTCGG CAAGCTCGAC ATGGATCGCC TGCGCATCTT TCTCGATGGC GAAGGCAGTC TGATGCATCC ACTCTACGAG CTGCTGTTCA ACAATGTGGC GCGTATCTCG GTCAGCTTCG TCGATGCCGG CCAGCAGCGC GAAATCGGGC TGGCGCCGGA TGCGATCACC CCGGTCGGCT TCGGTCATGA CGAAGGCTTG ATCGACTACT CCGAACGATC GTTTCTGGGC TACCGGCTGC TCCACGAATA CTTCACCTTT CCCGAGAAGT TTCTGTTCTT CGACCTGAAT GGTCTGGCAC GCCCGCTCGC CGGCAAGCCG GTGACGCAGA TCCAGATTCA TTTCTGGTTC CAGAACTACG ACCAGCACGA GCGGCTGGCA CGGCTCGCAC AGACCATCGG GCGCCACAAT TTCCGTCTTG GCTGCACCCC GGTCGTCAAC CTGTTTCCGC AGCAAGCCGA ACCGATCAAG CTTACCCATA CCCGCCACGA ATATCCGGTC GTCCCGGATG TACGGCACGC ACGCTCCACG GAGGTCGTTT CCATCGATGA GGTGACGCGT GTGATCCGTA CGGCGACACA GGACGAAGTG GCCCCGTGCC TGCCGTTCTT CGAGCCGCGC AACAGTGAAA AGCAAGCACG TCAAAGCTAT TGGATCGCGC GCCGCGTGGC TTCGGAAAAC GCCCGCGACC CGGGCACCGA ACTGCGCCTG CGAGTGGTCG ATCGTGAACT CGAAATGCTG GACGCCAGTC GCGACACCCT GAGTCTCAAG CTCACCTGCA GCAATCGCGA CCTCCCCCAG TTGATGACCT TCGGTCATCC GCAGGGGGAT TTCACGCTCG AGCGGGAACA GGTCGTGCAA CAGATCCGCT GCCTGCGCAA GCCGACGGCT CCGGTCCGCC CGCCCATGGG CAAGGGCGTG ATCTGGCGTC TGATCTCGCA CCTGTCGCTC AATCATATGT CGCTGGTATC GGATGGGCGC GAGGCGCTGA TGGAGCTGCT GTCACTCTAT AACTACCGTC AGGCCTCGGC GATTCGCAAG CAGATCAACG GCATCGCCTC GATCGCCAGC GAACCGGTGA TGACGCGCAT CGGCCATCCG CGCCCTGCCT TCGTGCGTGG CACCGGCATC ACCCTGGAGC TCGACGAAAG CCAGTTCACC GGCAGCGGCA TCTATCTGTT CGGCATGGTG CTGGATCACT TCTTCGGCCA GTACTGCAGC CTCAACAGCT TCACTCAACT CACCCTGCGC TCTCGTCAGC GCGAACAGCG AGTCGCCCAA TGGCAACCGA GAACCGGTAC TCAGCCCCTG GTCTGA
|
Protein sequence | MLDDLLPYYE KELSHLRFLG QEFAQRYPKI ASRLLLEGDD CEDPHAERMI ESFAFLSARV HKKLDDDFPE IVESFLDVLY PHYLRPTPAL SIVEFDPGAQ TSLTGAYHLP RHTALHSRPV GDTFCRFRTC YPVDVWPVAM SGAELSRLER SSFNAHGNDN VARLSLTLDS LGNTDFGKLD MDRLRIFLDG EGSLMHPLYE LLFNNVARIS VSFVDAGQQR EIGLAPDAIT PVGFGHDEGL IDYSERSFLG YRLLHEYFTF PEKFLFFDLN GLARPLAGKP VTQIQIHFWF QNYDQHERLA RLAQTIGRHN FRLGCTPVVN LFPQQAEPIK LTHTRHEYPV VPDVRHARST EVVSIDEVTR VIRTATQDEV APCLPFFEPR NSEKQARQSY WIARRVASEN ARDPGTELRL RVVDRELEML DASRDTLSLK LTCSNRDLPQ LMTFGHPQGD FTLEREQVVQ QIRCLRKPTA PVRPPMGKGV IWRLISHLSL NHMSLVSDGR EALMELLSLY NYRQASAIRK QINGIASIAS EPVMTRIGHP RPAFVRGTGI TLELDESQFT GSGIYLFGMV LDHFFGQYCS LNSFTQLTLR SRQREQRVAQ WQPRTGTQPL V
|
| |