| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2264 |
|---|
| Symbol | |
|---|
| ID | 4026074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 2545753 |
|---|
| End bp | 2547099 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637967468 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_574313 |
|---|
| Protein GI | 92114385 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAAAT ATAACCGCAT CATGTGGTCG GAGGGGATGT TCCTCCTTCC GCAGCATTTT
CAGTACCAGG ATGAGTTTCA CCAGCGTCAG TTGACCGAGC TGCGTCATGC CCAGCATCCG
TTCCAATGGG GGGTGCAGGA GCTTGTCGTC GACGACGGTG CCCTTGAGCA GGGGACGCTT
CGGCTGACAC GACTCAAGCT GGTGTTCCCC GACGGCTCCA TGATCGATGC GCCACAGCAT
GATCCCTTGC CGCCGGGACG CAGCCTGGAG GGGCTGGCTC GTAATGGTGA GGTCAAGATC
TACGCTGCCT TGCGTGCTTT CGAGCCCCAG TCGCCCAGTT ATCTCGAGCA GGACGCTCCC
CGGCATGGTG GGCGCCGTTT CGTGCAGCGC TTCGAAACCC GTCCCGATCT CAATGAGGGG
GGAGTCGAGA ACGAGCTGGG GACACTGGAA CTCAACGTGA CGTTGCTCAT GGAAGGGGAC
ACCCTGGATG GTTTTACCCA CTGTCCTGTC GCCTTGCTCA AACGCGATGC AGCCGGCGGC
TTTCGTCTGG ATACCGAAGG CTTCATGCCC CCTGCGCTGC ACCTCAATTC GGTTTCGCTA
CCGTTTGATA TCGCCAATCG CCTGATCGGC ATGCTGCAGG CACGCAGCGA AGCGCTTTCG
AGCCGTCGCC GGGAACGTGC GGACCAGGTC GCCGAGTTCG GCTCCAGCGA TGTCACCTTG
TTCTGGCTGC TCTACACCAT CAATCGCGCT TATCCGCAGC TGGCCCATCT GCTGTCGCAT
CCCAGGCTTC ACCCTGAAAT GCTTTATCGC TTCTTGGCGG AACTGTCGGC AAGCCTGATG
ACGTTCTCGA TGTCCCACAA GCTGGCGGAC ATCCCGGAAT ATGACCACCG CTCGCCTGCG
CAATGCCTGC TGGAGCTGGA GCGAGTAGTC CGAGAGCTCC TCGAAATCGT GGTGCCCAAC
CAGTACATCC CCATTCCTCT CGAGCAGACC CGCTCGTCCT ATTACGTCGG GCGACTCAAC
GATGAGCGTC TCAAGGACGC CGACTTCTAT ATCAGCGTGC ATGCCGACAT GCCCGGGGCG
AGGATTCTCG AGCTGGTGCC CAGGGCATTC AAGGTAGGTT CCCCCGAAGA TATCGAAGTG
GTGGTCAATA CCGCCATGCC GGGCGGCACG TTGACCCATG CCTCGCGCTT GCCCAGCGCG
ATCCCGGTGC GATTGGACAA TCACTATTTC GCGCTCGAGC CCCACGGCGC CGTCTATGAA
CGGATGATGG AGGCGCAGGC GATTGCCTTT TACGTGCCCA GTGGGTTCAA GAATCTCAGC
ATTGAATTGA TGGCGGTGAT GAAATGA
|
|---|
| Protein sequence | MSKYNRIMWS EGMFLLPQHF QYQDEFHQRQ LTELRHAQHP FQWGVQELVV DDGALEQGTL
RLTRLKLVFP DGSMIDAPQH DPLPPGRSLE GLARNGEVKI YAALRAFEPQ SPSYLEQDAP
RHGGRRFVQR FETRPDLNEG GVENELGTLE LNVTLLMEGD TLDGFTHCPV ALLKRDAAGG
FRLDTEGFMP PALHLNSVSL PFDIANRLIG MLQARSEALS SRRRERADQV AEFGSSDVTL
FWLLYTINRA YPQLAHLLSH PRLHPEMLYR FLAELSASLM TFSMSHKLAD IPEYDHRSPA
QCLLELERVV RELLEIVVPN QYIPIPLEQT RSSYYVGRLN DERLKDADFY ISVHADMPGA
RILELVPRAF KVGSPEDIEV VVNTAMPGGT LTHASRLPSA IPVRLDNHYF ALEPHGAVYE
RMMEAQAIAF YVPSGFKNLS IELMAVMK
|
|---|
| |