| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_2257 |
|---|
| Symbol | |
|---|
| ID | 4026067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 2535248 |
|---|
| End bp | 2536363 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637967461 |
|---|
| Product | ImpA-like protein |
|---|
| Protein accession | YP_574306 |
|---|
| Protein GI | 92114378 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.146099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCAAC TCGGCGAACT CTCCATCGAT GCGCTGCTGG CGCCCGTCGA GGGCGGTAGC
CATGCCGGCG GGGAGGATCT GTCCTTCTCG CTTCTCTTCG ATGACATCAA GGAGGCACGT
CGTGCCGATC CTGCATACTT GCCGCAAGGC GAGTGGCAAA CGGAGCTAAA GCAGTCCGAC
TGGGGGCAAG TGATCAACCT GTCCAGCGAG GCGCTGATCT CCCGGAGCAA GGATCTCCAG
CTCGCCGGCT GGTTGTGCGA GGGGCTGGCA TACCGCCAAG GCTTCGAGGG TATCGCCTTC
GGCCTGACGC TGGTGGCCAG AATGCTGGAC GAATATTGGC AGACCCTCTA CCCCGAGCTT
GACGAGGACG ACCTCGAGGA ACGCTCGGCG CGTCTGAGCT GGCTGGGCGA TACGCTGATC
GGCGTGGTCA GGACGCTGCC GCTGCTCGAT GGTGAGGGGT ACGGACTGGC TGACTACGAC
GAGTCCCGCC AGGTCGAGAA CCAGGCCCGC AATGATCCGG ATGCCATGGA TCGGGCCTTG
AGCGATGGCA AGATCAATGA CGAGATCTTC CAGCGCTCGG TCGTGCTCAC CAGTACCGAG
TTTCTGCAGC AGAAGCATGC CGTCATCGCC GCGATCCTGG CCGCATTGGA GCAGTTGGAG
CGCACCGTGG ATGCGCGGTT CGACCGTGAT GCGCCGAGTT TTTCCGGATT GCAGAAGGTG
CTGGTGCAGT GTCGCGAGCT GACCGAAAGG CTGTTGCGCG AGCGCGGTGC CAATGTCTCC
GCCGATACCG ACGCACAGGC CCCGGAAGAG GTGAAGGCCG AAGCGCCGGA CTCGAGCCGG
ATCGAGCCGA GCCTGACCAC CCCCGTGGCA GAGCCGGCGG GGGCGTTGCG TACCAAGCCG
CAAAGCCGCG ACGAAGCTTT CGAAATGCTC AACGGGGTCG CCCGCTACTT CAAGGATCGC
GAACCTCACA GTCCGGTGCC GTACTTGATC GAACGCGCCG TGAAGTGGGG CCGCATGCCG
CTGGAAGAGT GGCTCAAGGA TGTCATCAAG GACCATGGTG TCATCGACAA CATTCGCGAC
ACCCTGGGCA CGCAGCCGAA GGATGACGAT TACTGA
|
|---|
| Protein sequence | MEQLGELSID ALLAPVEGGS HAGGEDLSFS LLFDDIKEAR RADPAYLPQG EWQTELKQSD
WGQVINLSSE ALISRSKDLQ LAGWLCEGLA YRQGFEGIAF GLTLVARMLD EYWQTLYPEL
DEDDLEERSA RLSWLGDTLI GVVRTLPLLD GEGYGLADYD ESRQVENQAR NDPDAMDRAL
SDGKINDEIF QRSVVLTSTE FLQQKHAVIA AILAALEQLE RTVDARFDRD APSFSGLQKV
LVQCRELTER LLRERGANVS ADTDAQAPEE VKAEAPDSSR IEPSLTTPVA EPAGALRTKP
QSRDEAFEML NGVARYFKDR EPHSPVPYLI ERAVKWGRMP LEEWLKDVIK DHGVIDNIRD
TLGTQPKDDD Y
|
|---|
| |