Gene Csal_2248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2248 
Symbol 
ID4026058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2520955 
End bp2524437 
Gene Length3483 bp 
Protein Length1160 aa 
Translation table11 
GC content59% 
IMG OID637967453 
Producthypothetical protein 
Protein accessionYP_574298 
Protein GI92114370 
COG category[S] Function unknown 
COG ID[COG2268] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCAC CATCTCAAGC GAGCGCTCAT GCAGTGGAAA ATGAGACGGC GGGCCAGGAA 
AGCGGGCGCT GTCAGTTCTG TGAACGCAAG GGACTACCGA TCCTTCCCGT GCGCTATGCC
GTGTGTCAGC GTAACGGTCG TAACGGCGAT CTCCCGGAGC TCGAGACCTC GAGAATCCAG
GAGTTCACCG ACATCCTGCT GGACAAGACC CTTGTCGGTG GCGAAGAGCA GGGCAGAAGC
GTACCCGAGG AGGTCAAGGA CGAGCTCACG AACAGTACCG ACAGCCAGGT CAACAAATAC
ATTCTGCGCC AGCTGCGTCA GGGGTATCTC TACTTCTACG ATCAGGACAA CCCCAACGGC
CAGCACTGGT ACGCCTATGC AATCACCAGC GACGGCAAGT ACTACCAGTT TCCTGTGCTA
CAGCCGCCGG CCTTGGACGA TATCGTCTTC CCCGAGCGCT GCAAGAGCAA TCCCAGCGAT
GTCCTGGATG CTTCCCTCGT TACCCTGCCG TTTCCCGAGG ACTCGGGCAC GCTCTACTAC
GCATTCAGCG AGCACCCCTG GCCCGAAGCC CATATCCGCA TGATCGGGAA AGACGCGGAC
TGGCGTAATG CCCACATGCA GCAGGTGAAT ATTCCGGGTT GGGTCGGTGG GCAGCAGCAA
CCGTTCGCCT TCGGCATGGA CGAACTGGAA AAAGTCGCCG AATACAGCCA GGCGGCAGAG
AGTCTGGACG AACAGTTCTG GTCCACTGGT CCGACACGAC CGCTCTATAA GCCCGGCGAA
CTCAGGGATG CGATGCAACA GCGGCTCGAC CACGCCGCCA GTGAATACCA GGGCAAGGGG
CTCATTCTCG CGGTCAAGGA CGAGATCGGC ATCATCGACG AGTTGAACGC CTATCGGCAT
CAGGCGTTGG CCGAGGTCGA GAATTTCGTC TGCGAAAGCG ACGAGAACCG GCGCAAGCTG
CTCTGCATGC AGGCCATTGA GGCCTTCAAG CAGAACTTCG CGCGTAACTA CGTGGCGAGT
CAGGAGCAGT CACTGAATGA CAATGTCGAT AAAGCGCGAG CCGAACGCGA TGAGTTCCAG
GCGCAGGCGC CTTCCCGGGA AGATGCCTCT CCCAGACAGC GCGCCCAGCA CCAGCGACGG
TTAAGCCAGT TGAATCGGGC CGTACGAGAG GCCGAAACGG AAAGGAACGA CTTCCTGCGC
GATCAGCAGC GTGAAGCCGA AGCGAGGGCG GAAGAGAGGC AGCAACTTCA AGACGATATC
GAACGACTGG AGCACGAGCG AGCCGAACGT ATGGCAGAGC TCGAGCGTCG AGCGGCCAGC
GACGACCCAG CGGTCGCCAG GTCGGCCGAA GCGATGCGGC AGGACCCCTT CTACGACAAC
GAGCTTCAGC GCAAACGGTT TCTGCTGCGT AATATCAAAT CAGAGGCCGA ACGAATGGCG
GAGAGGCATG CCGCCCAGCT CGATAGTCTC TATGACAGTG ATGCGCTCGA AGCATTCAAG
CAGTCCTACG AAGAATACAC GGCCCATTGC CAGAGCCTGG CTGCCGTGTT CGACGATGAC
TATGCCATCT GGGTTTTGCA TGGCTTGCCG GCTGTCATCG GCCGCTATAG CCAGTCCGAC
TATTGGACAG GGCTGGGCCT CAGCGGCCTG ATAGGCAATG CACTGCGCGG TGGCATCATG
TCGCCTTCCA GCGGTGGCTT GTGGAAACTG CTGGCTGACG ATCTCGCCTC GAGCGAGTCG
CCGCTGCTCG TGGCGCTGTT CGCCAACAAC GCCGAACTAA TCGAGCAGGC ACTGCAGAGT
CTCGAGGCCC TGCCCCAAGA GTCGCAGCTA TCAGGGCAGA CGCTGAAAGT GTGGGGCGAA
CGCTTCCAGC GAGTACATGA ACGTACCCGA AAATCCGATG GTCGCGTGCC GACGAACGAC
CAGATCATCA ACCGCTGGCG CCCGCTACAA GATTTACTGG CGACGACGAT CGGCAACTCC
ATCGCCTCAC TAGTGCTGTA CCGAGCCGCC GGGGTGCCCG CGCCGGACTA CAAGCCGACG
CTCGGGCGGT TCGTGCGTTA CCACCAACTG GCCTTCATGG CCGATCCGCA AGCTCGGAAC
GGCGAGCAGC CGGCGCCCAC CCTGGTCGAG CGGGAGGTCA AGCTTTCCGA GCTCTACCAG
TGGTTACGCG CTGTCTCGCA AGCCAGTGCC AAAAAGCCGG ATCAAGGAGC CGACACCAGC
CAGGCGCTGA AGTCGCTGGA TGGCATGGTC GGCAACTTCT CGGCCCCGCT GGCCGACAGC
GACAGAACGG TACGTATTGC CTTGCCTGTC TACGTGGATA TCGCAGCGGT GACGGGTGGT
GGGAATGACG AGATAGTGCC GGCGGATAGC TATACGCCGG AGGACGAGCA GCAGCGCCGC
GGTGATCTGG CGCAGAACGC GCGGGATATC GGCAACACCC TGCTCAGCGC CCATAAGGGG
AGCGGCCAGG TCGCCGGTGC CTGCCTGGTC CTGTGGAGCC TGATCGCCTC CTTGCAGGAA
GGCGCCTTCG GTGACGACGA GGAGGGCGCC GACTGGAGCA AGATCATCGG GTCTGGCGTC
AGCGTGGCGA GTGGTGCGAT GGCGGGGATC GAAGGCTACC ATAAGATTCG AATGGCGAGC
CTGGGCCTGC CCTCGGAAGG CGCGATGATC AGCAGTGTGA AATGGGCCTT TGTTAGTGAC
GTGCTAGGCG CGGCGGGTGG CATGATCTCG ATCTGGGATG GCCTGAAAAA GCTGACGGAG
GCCGGTAAGG CCAGCAAGAC AGGGCAGAGT CTTAGTGCTG ACTACGGGAT GATCGTCGGC
GGTGTTGGCG TCATGGCGGG CATTGCCTCG ATCGTGGTGA TTGGTGCGAG CACGGGGGTC
GGACTCGTAG TGGGCGTATT TTTCGGGTTT CTGACGCTAC TGCTGGGTTA TGCCTTCGTC
ACCATGGTCT CCCCGGCAGT ACAGATGTGG GTGAACCGCA GCATTCTCGG CAAGCCATCG
GAACAGGAGG AGATGCAGGT TCTGCCGTTT GACGACATGG CCTCGGAGCA GAGCTCGTTG
GAGATGTTGT TCCAGGGGGT GGTGGTAGAA CTGTTTTGGT CTCCGGTAAG GCCGGATACG
AATCAGTATG TTAAATCTCC TTACGACATT GATACGGACG GTTTGAAAGC TGAGCTGGAG
CGAGCGGGTC AGCAAATACA GATAGATCTG AAAGTGACGA TTCCTTTGTC TGGCGTATCT
GCTTTTTATT TGCAATTCTT GGCGGTGGAT GTCGGTGAGT CTCTTTTTGA TTGGTCTTAT
GAGGGTTTGA GTGTCGAATC GTCAGGAGCG GCAGGTGAAA GATTTGGTGA GGCATTGGGG
GATTCAGAGA AGCCCGCTTT CGTAAAGGCG GGTGATCGTC GGTTTCTTGA ATGGAGCCAT
GTTTATTTAA GGGGTGATAT AGGTAGTAAT CTCCGTTTGG CGATTCGACT AAGCATCTTG
TGA
 
Protein sequence
MTAPSQASAH AVENETAGQE SGRCQFCERK GLPILPVRYA VCQRNGRNGD LPELETSRIQ 
EFTDILLDKT LVGGEEQGRS VPEEVKDELT NSTDSQVNKY ILRQLRQGYL YFYDQDNPNG
QHWYAYAITS DGKYYQFPVL QPPALDDIVF PERCKSNPSD VLDASLVTLP FPEDSGTLYY
AFSEHPWPEA HIRMIGKDAD WRNAHMQQVN IPGWVGGQQQ PFAFGMDELE KVAEYSQAAE
SLDEQFWSTG PTRPLYKPGE LRDAMQQRLD HAASEYQGKG LILAVKDEIG IIDELNAYRH
QALAEVENFV CESDENRRKL LCMQAIEAFK QNFARNYVAS QEQSLNDNVD KARAERDEFQ
AQAPSREDAS PRQRAQHQRR LSQLNRAVRE AETERNDFLR DQQREAEARA EERQQLQDDI
ERLEHERAER MAELERRAAS DDPAVARSAE AMRQDPFYDN ELQRKRFLLR NIKSEAERMA
ERHAAQLDSL YDSDALEAFK QSYEEYTAHC QSLAAVFDDD YAIWVLHGLP AVIGRYSQSD
YWTGLGLSGL IGNALRGGIM SPSSGGLWKL LADDLASSES PLLVALFANN AELIEQALQS
LEALPQESQL SGQTLKVWGE RFQRVHERTR KSDGRVPTND QIINRWRPLQ DLLATTIGNS
IASLVLYRAA GVPAPDYKPT LGRFVRYHQL AFMADPQARN GEQPAPTLVE REVKLSELYQ
WLRAVSQASA KKPDQGADTS QALKSLDGMV GNFSAPLADS DRTVRIALPV YVDIAAVTGG
GNDEIVPADS YTPEDEQQRR GDLAQNARDI GNTLLSAHKG SGQVAGACLV LWSLIASLQE
GAFGDDEEGA DWSKIIGSGV SVASGAMAGI EGYHKIRMAS LGLPSEGAMI SSVKWAFVSD
VLGAAGGMIS IWDGLKKLTE AGKASKTGQS LSADYGMIVG GVGVMAGIAS IVVIGASTGV
GLVVGVFFGF LTLLLGYAFV TMVSPAVQMW VNRSILGKPS EQEEMQVLPF DDMASEQSSL
EMLFQGVVVE LFWSPVRPDT NQYVKSPYDI DTDGLKAELE RAGQQIQIDL KVTIPLSGVS
AFYLQFLAVD VGESLFDWSY EGLSVESSGA AGERFGEALG DSEKPAFVKA GDRRFLEWSH
VYLRGDIGSN LRLAIRLSIL