Gene Csal_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_2142 
Symbol 
ID4026482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2411380 
End bp2411928 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content64% 
IMG OID637967347 
Producttranscription antitermination protein nusG 
Protein accessionYP_574192 
Protein GI92114264 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR01955] transcriptional activator RfaH 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.592011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATC AGCTCGACCC CGTTGCCTCC GACGATACGG CGGCGCGCCC ACGCTGGTAT 
GTGGTGCAGT GCAAGGGAGG CGAATCCTTT CGCGCCGGCG AGCACTTGAC CAATCAAGGC
TATCGCGTCT TCCATCCGGT GCTCGAGGTG CAGAAGAAAC GCCGCAACAA GCTGGTATGG
ATCGCCGAGC CCCTGTTTCC GCATTACCTT TTCATCCATC TCGACCGGGT GGCGAGCAAC
TGGCGCCCCA TCCGCTCCAC GCGCGGGGTG CTGAAGCTGG TGGGATTCGG CGATGAGCCG
CTGCCGGTGC CGGATGCGCT GATCGAGACG CTGGCCGCGC GTGCCCATCT CGACGAGGCG
AGCCGGACGT CGGGAAATGC CTACTTCCGG CCGGGCGAGA TCGTCGAGAT CACCGAAGGT
CCCTTCCAGG CACTGCAGGC CGTATTCGAT ACCCAGCAGG GCGATGAACG GGCCATCGTG
CTGCTCAATA TGCTGCACCA TCAGCAACGT CTCGAGTTGC CGGTGGGGCA TCTGCGCCGT
TCGACCTGA
 
Protein sequence
MTDQLDPVAS DDTAARPRWY VVQCKGGESF RAGEHLTNQG YRVFHPVLEV QKKRRNKLVW 
IAEPLFPHYL FIHLDRVASN WRPIRSTRGV LKLVGFGDEP LPVPDALIET LAARAHLDEA
SRTSGNAYFR PGEIVEITEG PFQALQAVFD TQQGDERAIV LLNMLHHQQR LELPVGHLRR
ST