Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_2003 |
Symbol | |
ID | 4027087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 2262328 |
End bp | 2264085 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637967198 |
Product | carbon starvation protein CstA |
Protein accession | YP_574053 |
Protein GI | 92114125 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.120083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCTA TCTGGATTGC CCTGTTCGGC GCCGTGTGTT TCGTGATGGG CTATCGCTTC TATTCGAAGT TCATCGCCGA ACGCATTTAT CGACTCGATG CCGACTTCCA GACGCCGGCG CACGCCTATC GCGACGGCGT CGACTACGTG CCCACCAACA AGTGGATTCT CTGGGGCCAC CATTTCACGT CGGTGGCCGG AGCGGCGCCC ATCGTGGGGC CTGCCATCGC GATCTACTGG GGCTGGCTGC CGGCCATCCT GTGGGTCGTG CTGGGGACCG TCTTCGCCGC CGGGGTGCAC GATTTCGGCG CGGTGGTGCT CTCCAACCGC CACAAGGGCC ATTCGATCGG CACGCTGGCC AACAAGCTGA TCGGACAGCG CGCCAAACTG CTGTTCCTGT TCATCATCTT GATCCTGGTG TTGATGGTCA ACGCGGTCTT CGCCTGGGTC ATCGCCAAGC TGTTCATCAC CTTCCCGGCC AGTGTGCTGT CGGTCTTCAT CCAGATCCCG CTCGCCGTGT GGATCGGCTA CCGCGTCTAT CGCCATTCGG GCTCGATGCT GCTGCCGTCG GTGATTGCAC TGGCCGTGAT GTATGGCGCA GCGCTGCTGG CCAGCGAGAT TCCCCTGCTG CAGATCGATC TGGTGAGCTG GTTCGGCGGT GCCGAGGCGC CGGTCGTGGG TGGCTTCAAC GGCACCTCGA TGGCCTTTCT GGTGTGGATC GTGGTGCTGA TGACATACGT CTACATCGCC TCGACGCTCC CCGTCTGGAA GCTGTTGCAG CCGCGCGATT ACATCAATTC GCACCAGCTC GTGGTCGGCC TGGCGCTGCT GTATCTGGGG CTGCTGTTCG GTGCACCGGA AATGACCGCC CCCAGCGTCA ACGGCGAAGC GGACATCAGC TGGTACCCGC TGCTGTTCAT CACCATCGCC TGCGGGGCGA TTTCCGGCTT CCACGGCCTG GTCGCCTCGG GCACCACGTC CAAGCAGCTC GACAAGGAAA CCGATGCCCG CATGGTCGGC TACGGGGGCG CTCTGGGTGA AGGCATGCTG GCGATGATCG CGATCATCGC GGTGGGCACC CTGTTCGCCT CCGGTACCGA TTTCACCGCG ACGTACTCGA GCTTTTCCGC GGCCGGCTCC AACGGCCTGG GCTCGTTCGT GAAAGGCGCT GGCCAGCTTG CCGGCAATCT GGGCATTCCC GAGCACATGG GCTCGACCCT GGTCGCGGTG ATCGTGGTGA GCTTCGCCGC CACCACGCTC GACACCGCCG TGCGCCTGAT GCGTTACATC ATCGCCGAGC TGGGCAACGA GTACGGCATG CCGGTGATCG CCCGCAAGCA CGTCGCGACC AGCATCGCCG TCATCGCCAG CGCCGCGCTG GTCATCCTGC CCGAAGGCCC CAACGGCTTC GGCTCCGGCG GCTACCTGCT GTGGCCGTTG TTCGGCACCA GCAACCAGCT GCTGGCCGGC ATCACGCTGA TGCTGGTCTC GGTATGGCTC AAGCGCCAGG GCCGCCCGGT GGTCTTCACC CTGGTTCCCA TGCTGTTCCT GCTGGTCATG ACACTGTGGG CCATGGGGCA GCAGGTGATC TTCACCTGGT CGGGCTTCGG CGATGCCGAC CGCAACCTGC TGCTGTTCAC CTTCGGCAGC CTGATCATGG TGTTCACGCT GTGGATCCTG CTCGAGGCGT CGCGAAGCTT CCGTCAGGGT GACCCGGCCG CGCAGCAGCA ACCGCTGAGT TCCGATGAAT CACGCTGA
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Protein sequence | MNAIWIALFG AVCFVMGYRF YSKFIAERIY RLDADFQTPA HAYRDGVDYV PTNKWILWGH HFTSVAGAAP IVGPAIAIYW GWLPAILWVV LGTVFAAGVH DFGAVVLSNR HKGHSIGTLA NKLIGQRAKL LFLFIILILV LMVNAVFAWV IAKLFITFPA SVLSVFIQIP LAVWIGYRVY RHSGSMLLPS VIALAVMYGA ALLASEIPLL QIDLVSWFGG AEAPVVGGFN GTSMAFLVWI VVLMTYVYIA STLPVWKLLQ PRDYINSHQL VVGLALLYLG LLFGAPEMTA PSVNGEADIS WYPLLFITIA CGAISGFHGL VASGTTSKQL DKETDARMVG YGGALGEGML AMIAIIAVGT LFASGTDFTA TYSSFSAAGS NGLGSFVKGA GQLAGNLGIP EHMGSTLVAV IVVSFAATTL DTAVRLMRYI IAELGNEYGM PVIARKHVAT SIAVIASAAL VILPEGPNGF GSGGYLLWPL FGTSNQLLAG ITLMLVSVWL KRQGRPVVFT LVPMLFLLVM TLWAMGQQVI FTWSGFGDAD RNLLLFTFGS LIMVFTLWIL LEASRSFRQG DPAAQQQPLS SDESR
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