Gene Csal_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1820 
Symbol 
ID4027377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp2068625 
End bp2070574 
Gene Length1950 bp 
Protein Length649 aa 
Translation table11 
GC content63% 
IMG OID637967009 
Productacetoacetyl-CoA synthetase 
Protein accessionYP_573871 
Protein GI92113943 
COG category[I] Lipid transport and metabolism 
COG ID[COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 
TIGRFAM ID[TIGR01217] acetoacetyl-CoA synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000185409 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCC CCCTCTGGCA GCCGTCGACG ACGGCCATCG AAAGCACGCA AATGCATGCC 
TTGATGCAGC GTATCAAGCG TGAACACGAC ATCGACCTGA ACGATTACGA GTCGCTGCAT
GCATGGAGCG TCGAGCACCT GGAAACGTTC TGGTCACTGC TCTGGGATGA ATTCGACATC
GTCGCCGAAC GCCGTGGCGA GGATGTGCTG GTGCATCCTG ATGCCATGCC CGGTGCCCGC
TGGTTTCCGC AAGCGCGCTT GAATTATGCT GCCAATATGT TGCGGCGGCG TGACGCGCAC
CCGGCTCTGA TCGTGCGCGA CGAACGACGG CGCCGCCGCG TCATCAGCTA CGCCGAGCTC
TACGACCAGG TCGCCAGGCT GGCCCACGCG CTTCAAGCCA GCGGTGTCAC CGAAGGCGAC
CGGGTCGCCG GCTTCGTGCC CAACAGCGAA CACGCCGTCA TTGCCCTGCT GGCCACGGCC
AGCCTCGGTG CCGTATGGTC TTCCTGCTCA CCGGACTTCG GCACGCATGG CGTGCTCGAC
CGCTTCGGAC AGATCACGCC CAAGGTCCTG ATCGCCACCG ATGGCTATAC CTGGAATGGC
AAGCCCATCG ACACACGCGC TCGCGTCGCC GAGATCGTCG AGTCCATCGA CTCCCTCGAG
CGCGTGGTGG TGTTTCCCTT CCTGGAGGAT GCCCCCGACC TCGATATCAT CCCCGGCGCC
ATCGCATGGT CGGACTTCCT GGACAACGAC GCCAGCCAGA TCGACTTTCA GGCCCTGCCG
TTCGATCATC CGCTCTATAT CCTCTATTCA TCGGGCACCA CCGGCGCGCC CAAGTGCATC
ATTCACACGG CGGGCGGTGC CTTGCTGCAG CATTTCAAGG AGCACCGCCT GCATAACGAC
CTCGACGCCG AGGATGTCTT CTTCTATTAC ACCACCTGCG GCTGGATGAT GTGGAACTGG
CTGGTCTCCG GACTGGGGTC CGGCGCCACG CTATTGCTCT ATGACGGGTC GCCTTTTGCC
CCGCACCCCG AAACGTTGTG GCAAATCGCC GGTGAAGAAG GCATCACGAT CTTCGGCACC
AGCGCCAAAT ACCTTTCGGC CTGCGAAAAA GAAGGCCTGA TGCCTGGCGA ACGCGCCGAC
CTTTCCCGGC TCCGCGCTGT GCTTTCCACC GGCTCCGCGC TCGCCCACGA ATCCTTCGAC
TACGTGTATG CGTCGATCAA GTCCGACCTC ATACTGGCCT CCATCTCCGG CGGCACGGAT
ATCGTGTCGT GCTTTGCGCT GGGCTGCCCG ATAAAGCCGG TCTATCGTGG CGAGCTCCAG
TGCCGCGGGC TGGGAATGGC GGTCGAGATA TACGACGAGC AAGGGCAGAG CATCACGCAC
GGCAAGGGCG AGCTCGTCTG CACGCGCCCC TTCCCCTGCA TGCCGATCGG ATTCTGGAAC
GATCCAAGCG ACGAGCGCTA CCGAGAGGCC TATTTTTCCA CCTTCCCCGG CGTCTGGGCC
CACGGTGACT ACGCCGAGCT GACCTCGCAC GGCGGCGTGA TCATCCATGG CCGGTCCGAC
TCGGTGCTCA ACCCGGGCGG TGTACGCATC GGCACCGCCG AGATCTATCG CCAGGTGGAA
AAGGTCGACG GAGTCCTGGA ATCCCTGTGC ATCGGTCAAG CATGGCAAAA CGACATCCGT
GTGGTGCTTT TCGTGCGCAT GCGTCCCGGT GTCACGCTCG ACGATGCCAA GCGCGATGAA
ATCCGCCGCA TGGTGCGTCT GCATACCACG CCACGCCATG TGCCCGCCAA GATCATTGCC
GTGGACGACA TCCCGCGCAC CTTGTCGGGC AAGATCGTCG AGGTCGCGGT ACGCAACGTC
GTGCATGGCG AGCCCGTCAA GAACCAGGAC GCGCTGGCCA ACCCCGAGGC ACTCAAGCTG
TTTGCCAACC TGCCGGCACT GGCCGAGTGA
 
Protein sequence
MTTPLWQPST TAIESTQMHA LMQRIKREHD IDLNDYESLH AWSVEHLETF WSLLWDEFDI 
VAERRGEDVL VHPDAMPGAR WFPQARLNYA ANMLRRRDAH PALIVRDERR RRRVISYAEL
YDQVARLAHA LQASGVTEGD RVAGFVPNSE HAVIALLATA SLGAVWSSCS PDFGTHGVLD
RFGQITPKVL IATDGYTWNG KPIDTRARVA EIVESIDSLE RVVVFPFLED APDLDIIPGA
IAWSDFLDND ASQIDFQALP FDHPLYILYS SGTTGAPKCI IHTAGGALLQ HFKEHRLHND
LDAEDVFFYY TTCGWMMWNW LVSGLGSGAT LLLYDGSPFA PHPETLWQIA GEEGITIFGT
SAKYLSACEK EGLMPGERAD LSRLRAVLST GSALAHESFD YVYASIKSDL ILASISGGTD
IVSCFALGCP IKPVYRGELQ CRGLGMAVEI YDEQGQSITH GKGELVCTRP FPCMPIGFWN
DPSDERYREA YFSTFPGVWA HGDYAELTSH GGVIIHGRSD SVLNPGGVRI GTAEIYRQVE
KVDGVLESLC IGQAWQNDIR VVLFVRMRPG VTLDDAKRDE IRRMVRLHTT PRHVPAKIIA
VDDIPRTLSG KIVEVAVRNV VHGEPVKNQD ALANPEALKL FANLPALAE