Gene Csal_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1743 
Symbol 
ID4028958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand+ 
Start bp1986519 
End bp1987178 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID637966931 
ProductGntR family transcriptional regulator 
Protein accessionYP_573794 
Protein GI92113866 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.821551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGACA AACCCGAAAG TGCCACGGCG GCCAGCACCG TCTTCGAGTC GTTGCGCCGC 
GACCTGATCA ACGGGCGTTT CGCGGCGGGA GAAAAGCTGG CCATCAATAC GCTCAAGGCC 
CATTACCGTG TCGGCCTGAG CCCGCTGCGA GAAGCCCTCA ACCGGCTGGC CGCCTATGGC 
CTGCTGCAAC AGGAGAACCA GCGCGGCTTT CGGGTGCCCG GCGTCTCGCG CGCCGAACTC 
GACGACATCG CCGGCATGCG TCGCGAACTC GAGGGCATGG CCCTGACGCG CGCCATGCAG 
CATGGCGATG CCCAGTGGGA GTCCGAGCTG CTGGCGGCGG CACATCGGCT CAAGCGCGCC 
GACGAGCAGC CCACGCCCCT CGAGGAGTGG GAGCTGTTGC ATACGCGTTT TCACCGCACG 
CTGGTGGCGC CCTGTGGCTC GCCCTGGCTA TTGCGTTTCA TCGAGCAGCT GCATGACCAG 
TTCGATCGTT ATCGGCGCAT GGCGCCGGCG GTTCCCGGCG TGCGCGCCGA ACTCGATGCC 
CAGCATCAGG AACTGGTGTC TCTGGCACTG GCACGTGACA TCGAGGGGGC ACGCGCGTTG 
CTGCAGTCGC ATATCCGCAT TTCCCACGAC GTGGCGCTGG GCGCGGTACC CGACGCATGA
 
Protein sequence
MRDKPESATA ASTVFESLRR DLINGRFAAG EKLAINTLKA HYRVGLSPLR EALNRLAAYG 
LLQQENQRGF RVPGVSRAEL DDIAGMRREL EGMALTRAMQ HGDAQWESEL LAAAHRLKRA 
DEQPTPLEEW ELLHTRFHRT LVAPCGSPWL LRFIEQLHDQ FDRYRRMAPA VPGVRAELDA 
QHQELVSLAL ARDIEGARAL LQSHIRISHD VALGAVPDA